C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172555 Pax3-003 ENSMUSG00000004872 10090 - 1:78183456-78197113 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000172555
Transcript ID Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000172555 0.002±0.00 0.025±0.00 0.058±0.04 0.005±0.00 0.007±0.00 0.014±0.00 0.011±0.00 0.059±0.00 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XL CIL_0006XL_0002 CGP 1:77367185-78197134
CIL_0008C0 CIL_0008C0_0002 VISTA 1:77814828-78415847
CIL_0008LF CIL_0008LF_0002 VISTA 1:77884098-78485294
CIL_000464 CIL_000464_0002 CGP 1:78101267-78420289

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258387 PAX3-003 protein_coding Homo_sapiens 0 950
ENST00000261716 TAOK1-001 protein_coding Homo_sapiens 0.0002 55
ENST00000336840 PAX3-002 protein_coding Homo_sapiens 0 950
ENST00000344493 PAX3-001 protein_coding Homo_sapiens 0 950
ENST00000350526 PAX3-006 protein_coding Homo_sapiens 0 928
ENST00000375375 PAX7-001 protein_coding Homo_sapiens 0 381
ENST00000392069 PAX3-008 protein_coding Homo_sapiens 0 950
ENST00000392070 PAX3-004 protein_coding Homo_sapiens 0 950
ENST00000400661 PAX7-003 protein_coding Homo_sapiens 0 409
ENST00000409551 PAX3-009 protein_coding Homo_sapiens 0 929
ENST00000409828 PAX3-005 protein_coding Homo_sapiens 0 928
ENST00000420770 PAX7-002 protein_coding Homo_sapiens 0 381
ENST00000536202 TAOK1-002 protein_coding Homo_sapiens 0.00007 55

Loading