| Transcript ID | Breast | Colon | Liver |
|---|---|---|---|
| ENST00000375604 | 1.009±0.32 | 0.505±0.00 | 0.216±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | MCF.2 cell line derived transforming sequence-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000375604  |
MCF2L-201 |
ENSG00000126217 |
9606 | + |
13:113001714-113099735  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00014E | CIL_00014E_0001 | CGP | 13:112690329-113099739 |
| CIL_0000RV | CIL_0000RV_0001 | CGP | 13:112894378-113120681 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005615 | IDA | extracellular space |
| GO:0005829 | TAS | cytosol |
| GO:0005886 | IEA | plasma membrane |
| GO:0007264 | TAS | small GTPase mediated signal transduction |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0035023 | IEA | regulation of Rho protein signal transduction |
| GO:0043065 | TAS | positive regulation of apoptotic process |
| GO:0048011 | TAS | neurotrophin TRK receptor signaling pathway |
| GO:0051056 | TAS | regulation of small GTPase mediated signal transduction |
| GO:0097190 | TAS | apoptotic signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000110879
|
Mcf2l-014 | protein_coding | Mus_musculus | 0 | 3430 |
|
ENSMUST00000110866
|
Mcf2l-004 | protein_coding | Mus_musculus | 0 | 3358 |
|
ENSMUST00000110867
|
Mcf2l-003 | protein_coding | Mus_musculus | 0 | 3358 |
|
ENSMUST00000095456
|
Mcf2l-009 | protein_coding | Mus_musculus | 0 | 3358 |
|
ENSMUST00000098927
|
Mcf2l-019 | protein_coding | Mus_musculus | 0 | 3293 |
|
ENSMUST00000173099
|
Mcf2l-016 | protein_coding | Mus_musculus | 0 | 3291 |
|
ENSMUST00000110871
|
Mcf2l-017 | protein_coding | Mus_musculus | 0 | 3147 |
|
ENSMUST00000110876
|
Mcf2l-001 | protein_coding | Mus_musculus | 0 | 3121 |
|
ENSMUST00000110873
|
Mcf2l-018 | protein_coding | Mus_musculus | 0 | 2929 |
|
ENSMUST00000145067
|
Mcf2l-006 | protein_coding | Mus_musculus | 0 | 2820 |
|
ENSMUST00000173006
|
Mcf2l-007 | protein_coding | Mus_musculus | 0 | 2444 |
|
ENSMUST00000126905
|
Mcf2l-008 | protein_coding | Mus_musculus | 0 | 2043 |
|
ENSMUST00000123811
|
Mcf2l-022 | protein_coding | Mus_musculus | 0 | 765 |
|
ENSMUST00000134227
|
Mcf2l-015 | protein_coding | Mus_musculus | 0 | 433 |
|
ENSMUST00000130302
|
Mcf2l-005 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000156405
|
Mcf2l-002 | processed_transcript | Mus_musculus | 0 | 392 |
