C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (concentrative nucleoside transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376238 SLC28A3-001 ENSG00000197506 9606 - 9:84275457-84340683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376238
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376238 0.055±0.00 0.043±0.00 0.056±0.00 0.660±0.00 0.091±0.07 0.044±0.01 0.060±0.00 0.064±0.02 0.143±0.06 0.010±0.00 0.653±0.42 0.187±0.15 0.173±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H3 CIL_0006H3_0001 CGP 9:83980711-84340683
CIL_0006HO CIL_0006HO_0001 CGP 9:84275457-85027070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0005783 IEA endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006863 IEA purine nucleobase transport
GO:0015389 IEA pyrimidine- and adenine-specific:sodium symporter activity
GO:0015390 IEA purine-specific nucleoside:sodium symporter activity
GO:0015855 IEA pyrimidine nucleobase transport
GO:0015860 IEA purine nucleoside transmembrane transport
GO:0015864 IEA pyrimidine nucleoside transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport
GO:0072531 IEA pyrimidine-containing compound transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022036 Slc28a3-001 protein_coding Mus_musculus 0 1681

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