C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022036 Slc28a3-001 ENSMUSG00000021553 10090 - 13:58553305-58610877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022036 1.145±0.80 0.034±0.01 0.043±0.01 0.063±0.03 0.434±0.09 1.568±0.31 0.044±0.01 0.014±0.00 0.015±0.01 0.714±0.50 0.011±0.00 2.685±1.08 0.981±0.60 0.398±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H3 CIL_0006H3_0002 CGP 13:58402597-58610877
CIL_0006HO CIL_0006HO_0002 CGP 13:58545399-59133970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005887 ISS integral component of plasma membrane
GO:0006863 IDA purine nucleobase transport
GO:0015389 IDA pyrimidine- and adenine-specific:sodium symporter activity
GO:0015390 IDA purine-specific nucleoside:sodium symporter activity
GO:0015855 IDA pyrimidine nucleobase transport
GO:0015860 IDA purine nucleoside transmembrane transport
GO:0015864 IDA pyrimidine nucleoside transport
GO:0072531 IDA pyrimidine-containing compound transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376238 SLC28A3-001 protein_coding Homo_sapiens 0 1681

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