C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flotillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376389 FLOT1-001 ENSG00000137312 9606 - 6:30727709-30742733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376389 17.907±0.00 27.946±0.00 1.704±0.00 11.137±5.13 10.010±4.62 16.317±0.00 11.554±9.58 10.358±7.02 6.704±4.02 18.448±12.76 7.180±2.02 26.193±21.52 48.941±9.60 18.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IPI protease binding
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005768 IDA endosome
GO:0005815 IDA microtubule organizing center
GO:0005886 IEA plasma membrane
GO:0005901 TAS caveola
GO:0005925 IDA focal adhesion
GO:0007409 IEA axonogenesis
GO:0008180 IDA COP9 signalosome
GO:0016020 IDA membrane
GO:0016021 TAS integral component of membrane
GO:0016600 IEA flotillin complex
GO:0022617 IMP extracellular matrix disassembly
GO:0034451 IDA centriolar satellite
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0042383 IEA sarcolemma
GO:0045121 IDA membrane raft
GO:0070062 IDA extracellular vesicular exosome
GO:0072659 IEA protein localization to plasma membrane
GO:0090002 IMP establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001569 Flot1-001 protein_coding Mus_musculus 0 1692
ENSMUST00000174080 Flot1-011 protein_coding Mus_musculus 0 1153
ENSMUST00000173628 Flot1-002 nonsense_mediated_decay Mus_musculus 0 905
ENSMUST00000173147 Flot1-006 protein_coding Mus_musculus 0 819
ENSMUST00000172846 Flot1-003 protein_coding Mus_musculus 0 802
ENSMUST00000173493 Flot1-005 protein_coding Mus_musculus 0 800
ENSMUST00000173337 Flot1-004 retained_intron Mus_musculus 0 571
ENSMUST00000174227 Flot1-007 retained_intron Mus_musculus 0 191

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