C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flotillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173147 Flot1-006 ENSMUSG00000059714 10090 + 17:35823549-35825757 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000173147
Transcript ID Breast Ovary
ENSMUST00000173147 9.809±0.00 15.874±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785
CIL_0001X1 CIL_0001X1_0002 CGP 17:35823230-35838306

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005901 IDA caveola
GO:0007409 IMP axonogenesis
GO:0016020 IDA membrane
GO:0016600 IDA flotillin complex
GO:0035023 IMP regulation of Rho protein signal transduction
GO:0042383 IDA sarcolemma
GO:0045121 IDA membrane raft
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376389 FLOT1-001 protein_coding Homo_sapiens 0 819
ENST00000383382 FLOT1-001 protein_coding Homo_sapiens 0 819
ENST00000383562 FLOT1-001 protein_coding Homo_sapiens 0 819
ENST00000411778 FLOT1-007 protein_coding Homo_sapiens 2e-17 94
ENST00000411848 FLOT1-006 protein_coding Homo_sapiens 0 501
ENST00000411944 FLOT1-010 protein_coding Homo_sapiens 0 501
ENST00000413165 FLOT1-008 protein_coding Homo_sapiens 0 499
ENST00000416018 FLOT1-010 protein_coding Homo_sapiens 0 501
ENST00000416389 FLOT1-010 protein_coding Homo_sapiens 0 501
ENST00000418160 FLOT1-007 protein_coding Homo_sapiens 2e-17 94
ENST00000421565 FLOT1-009 protein_coding Homo_sapiens 0 819
ENST00000422636 FLOT1-008 protein_coding Homo_sapiens 0 499
ENST00000422714 FLOT1-010 protein_coding Homo_sapiens 0 497
ENST00000424683 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000426417 FLOT1-008 protein_coding Homo_sapiens 1e-17 94
ENST00000427784 FLOT1-007 protein_coding Homo_sapiens 2e-17 94
ENST00000428438 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000430384 FLOT1-004 protein_coding Homo_sapiens 0 819
ENST00000430843 FLOT1-002 protein_coding Homo_sapiens 0 819
ENST00000431913 FLOT1-006 protein_coding Homo_sapiens 0 819
ENST00000431966 FLOT1-007 protein_coding Homo_sapiens 0 499
ENST00000432428 FLOT1-006 protein_coding Homo_sapiens 0 497
ENST00000436025 FLOT1-005 protein_coding Homo_sapiens 0 459
ENST00000436197 FLOT1-009 protein_coding Homo_sapiens 0 819
ENST00000436822 FLOT1-001 protein_coding Homo_sapiens 0 819
ENST00000437093 FLOT1-009 protein_coding Homo_sapiens 0 497
ENST00000438134 FLOT1-007 protein_coding Homo_sapiens 2e-17 94
ENST00000438162 FLOT1-006 protein_coding Homo_sapiens 0 819
ENST00000439376 FLOT1-006 protein_coding Homo_sapiens 0 819
ENST00000439743 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000442932 FLOT1-006 protein_coding Homo_sapiens 0 819
ENST00000444068 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000444497 FLOT1-008 protein_coding Homo_sapiens 0 499
ENST00000444632 FLOT1-001 protein_coding Homo_sapiens 0 819
ENST00000445319 FLOT1-010 protein_coding Homo_sapiens 0 501
ENST00000445383 FLOT1-009 protein_coding Homo_sapiens 0 819
ENST00000445669 FLOT1-008 protein_coding Homo_sapiens 0 499
ENST00000445853 FLOT1-009 protein_coding Homo_sapiens 0 819
ENST00000446072 FLOT1-001 protein_coding Homo_sapiens 0 497
ENST00000454249 FLOT1-006 protein_coding Homo_sapiens 0 819
ENST00000454773 FLOT1-009 protein_coding Homo_sapiens 0 819
ENST00000454845 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000455034 FLOT1-007 protein_coding Homo_sapiens 2e-17 94
ENST00000456042 FLOT1-008 protein_coding Homo_sapiens 0 499
ENST00000456844 FLOT1-005 protein_coding Homo_sapiens 0 780
ENST00000457133 FLOT1-008 protein_coding Homo_sapiens 0 497
ENST00000457733 FLOT1-003 protein_coding Homo_sapiens 0 819
ENST00000458306 FLOT1-010 protein_coding Homo_sapiens 0 501
ENST00000459887 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000460694 FLOT1-002 processed_transcript Homo_sapiens 0 501
ENST00000462145 FLOT1-014 retained_intron Homo_sapiens 4e-37 159
ENST00000465796 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000466680 FLOT1-002 processed_transcript Homo_sapiens 0 501
ENST00000470163 FLOT1-002 processed_transcript Homo_sapiens 0 497
ENST00000470643 FLOT1-002 processed_transcript Homo_sapiens 0 501
ENST00000472990 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000480605 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000481740 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000482241 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000482675 FLOT1-013 retained_intron Homo_sapiens 0 503
ENST00000484168 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000484693 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000484899 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000488811 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000490802 FLOT1-015 processed_transcript Homo_sapiens 0 501
ENST00000492441 FLOT1-002 processed_transcript Homo_sapiens 0 501
ENST00000495886 FLOT1-003 retained_intron Homo_sapiens 0 503
ENST00000496175 FLOT1-002 processed_transcript Homo_sapiens 0 501

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