C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flotillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001569 Flot1-001 ENSMUSG00000059714 10090 + 17:35823230-35832791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001569 40.331±12.05 34.917±2.96 55.101±8.02 22.433±4.11 27.635±11.28 28.130±2.22 61.646±5.57 20.790±1.16 15.544±4.97 41.748±3.18 24.488±4.80 27.724±4.38 18.516±0.95 4.779±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785
CIL_0001X1 CIL_0001X1_0002 CGP 17:35823230-35838306

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0005515 IPI protein binding
GO:0005765 IEA lysosomal membrane
GO:0005768 ISS endosome
GO:0005815 IEA microtubule organizing center
GO:0005886 IDA plasma membrane
GO:0005901 IDA caveola
GO:0005925 IEA focal adhesion
GO:0007409 IMP axonogenesis
GO:0008180 IEA COP9 signalosome
GO:0016020 IDA membrane
GO:0016600 IDA flotillin complex
GO:0022617 IEA extracellular matrix disassembly
GO:0034451 IEA centriolar satellite
GO:0035023 IMP regulation of Rho protein signal transduction
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0042383 IDA sarcolemma
GO:0045121 IDA membrane raft
GO:0070062 IEA extracellular vesicular exosome
GO:0072659 IMP protein localization to plasma membrane
GO:0090002 IEA establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376389 FLOT1-001 protein_coding Homo_sapiens 0 1692
ENST00000383382 FLOT1-001 protein_coding Homo_sapiens 0 1692
ENST00000383562 FLOT1-001 protein_coding Homo_sapiens 0 1692
ENST00000411778 FLOT1-007 protein_coding Homo_sapiens 0 289
ENST00000411848 FLOT1-006 protein_coding Homo_sapiens 0 529
ENST00000411944 FLOT1-010 protein_coding Homo_sapiens 0 529
ENST00000413165 FLOT1-008 protein_coding Homo_sapiens 0 904
ENST00000416018 FLOT1-010 protein_coding Homo_sapiens 0 529
ENST00000416389 FLOT1-010 protein_coding Homo_sapiens 0 529
ENST00000418160 FLOT1-007 protein_coding Homo_sapiens 0 289
ENST00000421565 FLOT1-009 protein_coding Homo_sapiens 0 950
ENST00000422636 FLOT1-008 protein_coding Homo_sapiens 0 904
ENST00000422714 FLOT1-010 protein_coding Homo_sapiens 0 525
ENST00000424683 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000426417 FLOT1-008 protein_coding Homo_sapiens 4e-18 95
ENST00000427701 FLOT1-001 protein_coding Homo_sapiens 0 689
ENST00000427784 FLOT1-007 protein_coding Homo_sapiens 0 289
ENST00000428438 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000430384 FLOT1-004 protein_coding Homo_sapiens 0 856
ENST00000430843 FLOT1-002 protein_coding Homo_sapiens 0 880
ENST00000431913 FLOT1-006 protein_coding Homo_sapiens 0 1029
ENST00000431966 FLOT1-007 protein_coding Homo_sapiens 0 534
ENST00000432428 FLOT1-006 protein_coding Homo_sapiens 0 706
ENST00000436025 FLOT1-005 protein_coding Homo_sapiens 0 459
ENST00000436197 FLOT1-009 protein_coding Homo_sapiens 0 950
ENST00000436822 FLOT1-001 protein_coding Homo_sapiens 0 1692
ENST00000437093 FLOT1-009 protein_coding Homo_sapiens 0 627
ENST00000438134 FLOT1-007 protein_coding Homo_sapiens 0 289
ENST00000438162 FLOT1-006 protein_coding Homo_sapiens 0 1029
ENST00000439376 FLOT1-006 protein_coding Homo_sapiens 0 1029
ENST00000439396 FLOT1-007 protein_coding Homo_sapiens 0 287
ENST00000439743 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000442932 FLOT1-006 protein_coding Homo_sapiens 0 1029
ENST00000444068 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000444497 FLOT1-008 protein_coding Homo_sapiens 0 904
ENST00000444632 FLOT1-001 protein_coding Homo_sapiens 0 1692
ENST00000445319 FLOT1-010 protein_coding Homo_sapiens 0 529
ENST00000445383 FLOT1-009 protein_coding Homo_sapiens 0 950
ENST00000445395 FLOT1-009 protein_coding Homo_sapiens 0 248
ENST00000445669 FLOT1-008 protein_coding Homo_sapiens 0 904
ENST00000445853 FLOT1-009 protein_coding Homo_sapiens 0 950
ENST00000446072 FLOT1-001 protein_coding Homo_sapiens 0 1343
ENST00000454249 FLOT1-006 protein_coding Homo_sapiens 0 1029
ENST00000454773 FLOT1-009 protein_coding Homo_sapiens 0 950
ENST00000454845 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000455034 FLOT1-007 protein_coding Homo_sapiens 0 289
ENST00000456042 FLOT1-008 protein_coding Homo_sapiens 0 904
ENST00000456844 FLOT1-005 protein_coding Homo_sapiens 0 784
ENST00000457133 FLOT1-008 protein_coding Homo_sapiens 0 902
ENST00000457733 FLOT1-003 protein_coding Homo_sapiens 0 856
ENST00000458306 FLOT1-010 protein_coding Homo_sapiens 0 529
ENST00000459887 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000460694 FLOT1-002 processed_transcript Homo_sapiens 0 658
ENST00000462145 FLOT1-014 retained_intron Homo_sapiens 4e-37 159
ENST00000463435 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000463572 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000464837 FLOT1-011 retained_intron Homo_sapiens 0 250
ENST00000465796 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000466680 FLOT1-002 processed_transcript Homo_sapiens 0 658
ENST00000470163 FLOT1-002 processed_transcript Homo_sapiens 0 654
ENST00000470643 FLOT1-002 processed_transcript Homo_sapiens 0 658
ENST00000472990 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000476576 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000476729 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000479358 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000480605 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000481740 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000481843 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000482241 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000482522 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000482675 FLOT1-013 retained_intron Homo_sapiens 0 532
ENST00000484168 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000484693 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000484797 FLOT1-012 retained_intron Homo_sapiens 0 470
ENST00000484899 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000487376 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000487385 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000487549 FLOT1-012 retained_intron Homo_sapiens 0 250
ENST00000488811 FLOT1-004 retained_intron Homo_sapiens 4e-37 159
ENST00000490802 FLOT1-015 processed_transcript Homo_sapiens 0 536
ENST00000491057 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000492441 FLOT1-002 processed_transcript Homo_sapiens 0 658
ENST00000493620 FLOT1-011 retained_intron Homo_sapiens 0 713
ENST00000495886 FLOT1-003 retained_intron Homo_sapiens 0 532
ENST00000496175 FLOT1-002 processed_transcript Homo_sapiens 0 658

Loading