C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376552 TLE4-008 ENSG00000106829 9606 + 9:79571773-79725499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLungMuscleOvaryPlacentaENST00000376552
Transcript ID Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000376552 3.407±0.37 1.081±0.00 1.154±0.21 0.830±0.44 0.438±0.00 3.479±1.39 1.877±0.00 1.682±0.07 2.001±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O8 CIL_0008O8_0001 VISTA 9:79095331-79696632
CIL_0007KE CIL_0007KE_0002 UCNEbase 9:79125686-82895571
CIL_0009CX CIL_0009CX_0001 VISTA 9:79204182-79805940
CIL_0009CZ CIL_0009CZ_0001 VISTA 9:79309170-79911842
CIL_00087P CIL_00087P_0001 VISTA 9:79329886-79931843
CIL_0009BM CIL_0009BM_0001 VISTA 9:79351142-79952138
CIL_0007V5 CIL_0007V5_0001 VISTA 9:79359339-79961438
CIL_0008CI CIL_0008CI_0001 VISTA 9:79361205-79963619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 NAS nucleus
GO:0005654 TAS nucleoplasm
GO:0007219 TAS Notch signaling pathway
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052011 Tle4-201 protein_coding Mus_musculus 0 3773
ENSMUST00000167776 Tle4-202 protein_coding Mus_musculus 0 3729
ENSMUST00000102848 Tle1-006 protein_coding Mus_musculus 0 1295
ENSMUST00000074216 Tle1-201 protein_coding Mus_musculus 0 1290
ENSMUST00000030095 Tle1-008 protein_coding Mus_musculus 0 1290
ENSMUST00000132550 Tle1-005 retained_intron Mus_musculus 0 1290
ENSMUST00000072695 Tle1-001 protein_coding Mus_musculus 0 1290
ENSDART00000100633 gro2-203 protein_coding Danio_rerio 0 780
ENSDART00000025018 gro2-201 protein_coding Danio_rerio 0 780
ENSDART00000100632 gro2-202 protein_coding Danio_rerio 0 780
ENSDART00000045679 gro2-001 protein_coding Danio_rerio 0 780
ENSDART00000127222 aes-202 protein_coding Danio_rerio 0 243
ENSDART00000105564 aes-201 protein_coding Danio_rerio 0 243

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