C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of variegation 3-9 homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115636 Suv39h1-004 ENSMUSG00000039231 10090 - X:8067409-8074729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENSMUST00000115636
Transcript ID Heart Testis
ENSMUST00000115636 0.282±0.00 0.791±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000792 IDA heterochromatin
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005677 IDA chromatin silencing complex
GO:0005720 TAS nuclear heterochromatin
GO:0006323 TAS DNA packaging
GO:0006342 TAS chromatin silencing
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0007049 IEA cell cycle
GO:0008168 IDA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0008276 TAS protein methyltransferase activity
GO:0018024 IDA histone-lysine N-methyltransferase activity
GO:0030154 IEA cell differentiation
GO:0034968 IGI histone lysine methylation
GO:0036123 IMP histone H3-K9 dimethylation
GO:0036124 IMP histone H3-K9 trimethylation
GO:0042754 IMP negative regulation of circadian rhythm
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046974 IDA histone methyltransferase activity (H3-K9 specific)
GO:0048511 IEA rhythmic process
GO:0051567 IGI histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337852 SUV39H1-201 protein_coding Homo_sapiens 0 861
ENST00000355086 SRGAP1-001 protein_coding Homo_sapiens 0.000009 60
ENST00000376687 SUV39H1-001 protein_coding Homo_sapiens 0 1046
ENST00000397802 POLR3D-001 protein_coding Homo_sapiens 0.00000005 66
ENST00000493357 MIER1-005 processed_transcript Homo_sapiens 0.0000000003 69
ENST00000562303 RPAP1-005 nonsense_mediated_decay Homo_sapiens 0.000000004 69

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