C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin and CBS domain divalent metal cation transport mediator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377075 CNNM4-001 ENSG00000158158 9606 + 2:96760902-96811891 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377075 0.640±0.00 1.218±0.00 0.452±0.00 1.390±0.67 1.272±0.13 2.902±2.14 0.997±0.25 1.064±0.89 0.667±0.17 2.059±0.89 3.013±2.00 4.914±3.69 2.574±0.63 7.255±2.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0001 CGP 2:96705929-96811891
CIL_0003O9 CIL_0003O9_0001 CGP 2:96760902-96833911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0007601 IEA visual perception
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0031214 IEA biomineral tissue development
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153128 Cnnm4-001 protein_coding Mus_musculus 0 2734
ENSMUST00000077666 Cnnm2-201 protein_coding Mus_musculus 0 721
ENSMUST00000099373 Cnnm2-202 protein_coding Mus_musculus 0 721
ENSDART00000115310 CNNM4 (2 of 3)-201 protein_coding Danio_rerio 0 710
ENSDART00000111766 CABZ01071058.1-201 protein_coding Danio_rerio 0 292

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