C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and AT hook domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377838 ZFAT-001 ENSG00000066827 9606 - 8:134477792-134713038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartMuscleOvaryPlacentaTestisENST00000377838
Transcript ID Brain Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000377838 0.668±0.00 0.811±0.00 0.355±0.00 0.859±0.00 0.459±0.00 0.602±0.45 12.247±0.00 1.714±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PT CIL_0004PT_0001 CGP 8:133454848-134713049
CIL_0004PU CIL_0004PU_0001 CGP 8:134477788-135656722

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0030097 IEA hemopoiesis
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0060712 IEA spongiotrophoblast layer development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160248 Zfat-002 protein_coding Mus_musculus 0 4113
ENSMUST00000162173 Zfat-004 protein_coding Mus_musculus 0 3548
ENSMUST00000162054 Zfat-001 protein_coding Mus_musculus 0 3476
ENSMUST00000159430 Zfat-003 protein_coding Mus_musculus 0 1299
ENSDART00000109710 zfat-201 protein_coding Danio_rerio 0 375
ENSDART00000156351 zfat-001 protein_coding Danio_rerio 0 375
ENSMUST00000161139 Zfat-005 retained_intron Mus_musculus 0 348

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