C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB4B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378307 RAB4B-008 ENSG00000167578 9606 + 19:40778309-40796890 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NO CIL_0000NO_0001 CGP 19:40771648-40786685

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153511 Rab4b-003 nonsense_mediated_decay Mus_musculus 0 1000
ENSMUST00000093040 Rab4b-001 protein_coding Mus_musculus 0 516
ENSMUST00000154724 Gm21983-001 nonsense_mediated_decay Mus_musculus 0 486
ENSMUST00000134462 Rab4b-002 retained_intron Mus_musculus 0 486
ENSMUST00000152753 Rab4b-006 processed_transcript Mus_musculus 0 416
ENSMUST00000131278 Rab4b-008 processed_transcript Mus_musculus 0 252
ENSMUST00000141906 Rab4b-007 processed_transcript Mus_musculus 0 237
ENSMUST00000131420 Rab4b-004 processed_transcript Mus_musculus 3.00018e-42 176

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