C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphate cytidylyltransferase 1, choline, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379145 PCYT1B-003 ENSG00000102230 9606 - X:24558087-24672677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverOvaryPlacentaTestisENST00000379145
Transcript ID Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENST00000379145 0.094±0.00 4.440±0.00 0.074±0.07 0.053±0.03 0.042±0.03 0.156±0.19 0.407±0.00 1.718±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084H CIL_00084H_0001 VISTA X:24441239-25041771
CIL_0008NE CIL_0008NE_0001 VISTA X:24504486-25106506
CIL_0008NF CIL_0008NF_0001 VISTA X:24546114-25147616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004105 IEA choline-phosphate cytidylyltransferase activity
GO:0005737 TAS cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006656 TAS phosphatidylcholine biosynthetic process
GO:0006657 IEA CDP-choline pathway
GO:0009058 IEA biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113933 Pcyt1b-003 protein_coding Mus_musculus 0 1325
ENSMUST00000045898 Pcyt1b-001 protein_coding Mus_musculus 0 1315
ENSDART00000081198 pcyt1bb-201 protein_coding Danio_rerio 0 300

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