C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association (RalGDS/AF-6) domain family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379376 RASSF2-201 ENSG00000101265 9606 - 20:4780026-4815123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000379376
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000379376 2.012±0.00 3.943±0.00 4.016±0.00 0.951±0.00 2.309±0.00 0.284±0.00 1.017±0.20 2.458±1.60 4.832±0.00 1.627±1.06 1.011±0.00 4.988±2.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S5 CIL_0004S5_0001 CGP 20:4780023-5010293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007049 IEA cell cycle
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103182 Rassf2-005 protein_coding Mus_musculus 0 1168
ENSMUST00000028814 Rassf2-001 protein_coding Mus_musculus 0 1168
ENSMUST00000139047 Rassf2-003 protein_coding Mus_musculus 0 704
ENSMUST00000155829 Rassf2-002 retained_intron Mus_musculus 0 590
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.00000004 66
ENSMUST00000111336 Sdhc-001 protein_coding Mus_musculus 0.00003 57

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