C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein geranylgeranyltransferase type I, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379615 PGGT1B-002 ENSG00000164219 9606 - 5:115212402-115262851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverMuscleOvaryPlacentaENST00000379615
Transcript ID Bladder Kidney Liver Muscle Ovary Placenta
ENST00000379615 4.252±0.00 2.628±0.00 2.969±0.00 3.029±0.00 4.597±0.00 2.604±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UL CIL_0004UL_0001 CGP 5:115124762-115262872
CIL_0004UK CIL_0004UK_0001 CGP 5:115210830-115296831

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004661 IDA protein geranylgeranyltransferase activity
GO:0004662 ISS CAAX-protein geranylgeranyltransferase activity
GO:0005953 IDA CAAX-protein geranylgeranyltransferase complex
GO:0008270 ISS zinc ion binding
GO:0018344 IDA protein geranylgeranylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025354 Pggt1b-201 protein_coding Mus_musculus 0 363

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