C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122692-ENSG00000086062 CGP 9606 9:33041764-33167356
GeneTranscriptPositionBiotype
ENSG00000086062 (B4GALT1)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 		ENST00000379731 (B4GALT1-001) 33110637-33167356 protein_coding
ENST00000535206 (B4GALT1-201) 33104082-33167356 protein_coding
ENSG00000122692 (SMU1)
smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 		ENST00000397149 (SMU1-001) 33041764-33076659 protein_coding
CIL_00061E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028409-ENSMUSG00000028413 CGP 10090 4:40736542-40854005
GeneTranscriptPositionBiotype
ENSMUSG00000028409 (Smu1)
smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 		ENSMUST00000030117 (Smu1-001) 40736542-40757923 protein_coding
ENSMUST00000130503 (Smu1-002) 40743584-40757883 processed_transcript
ENSMUST00000137415 (Smu1-004) 40755700-40757398 processed_transcript
ENSMUST00000150574 (Smu1-003) 40754376-40757831 processed_transcript
ENSMUSG00000028410 (Dnaja1)
DnaJ (Hsp40) homolog, subfamily A, member 1 		ENSMUST00000030118 (Dnaja1-001) 40722480-40734964 protein_coding
ENSMUST00000125442 (Dnaja1-009) 40722945-40728164 protein_coding
ENSMUST00000126020 (Dnaja1-005) 40723362-40724111 processed_transcript
ENSMUST00000129204 (Dnaja1-002) 40722922-40733900 processed_transcript
ENSMUST00000137246 (Dnaja1-004) 40722930-40731759 protein_coding
ENSMUST00000137476 (Dnaja1-007) 40722559-40730193 processed_transcript
ENSMUST00000139406 (Dnaja1-003) 40722150-40723795 processed_transcript
ENSMUST00000148976 (Dnaja1-008) 40724049-40732263 processed_transcript
ENSMUST00000149794 (Dnaja1-006) 40723117-40726180 protein_coding
ENSMUST00000164233 (Dnaja1-201) 40722922-40737149 protein_coding
ENSMUSG00000028413 (B4galt1)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 		ENSMUST00000030121 (B4galt1-001) 40804602-40854005 protein_coding
ENSMUST00000108096 (B4galt1-002) 40809154-40854005 protein_coding
ENSMUSG00000056412 (Gm12396)
predicted gene 12396 		ENSMUST00000121600 (Gm12396-001) 40775259-40775564 processed_pseudogene
ENSMUSG00000094959 (Gm24112)
predicted gene, 24112 		ENSMUST00000179159 (Gm24112-201) 40850144-40850226 miRNA
ENSMUSG00000095871 (Gm25931)
predicted gene, 25931 		ENSMUST00000175230 (Gm25931-201) 40850320-40850402 miRNA
ENSMUSG00000096377 (Mir5123)
microRNA 5123 		ENSMUST00000177794 (Mir5123-201) 40850056-40850138 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061E_0001ENSG00000086062ENST00000379731ENST00000535206ENSG00000122692ENST00000397149CIL_00061E_0002ENSMUSG00000028409ENSMUST00000030117ENSMUST00000130503ENSMUST00000137415ENSMUST00000150574ENSMUSG00000028410ENSMUST00000030118ENSMUST00000125442ENSMUST00000126020ENSMUST00000129204ENSMUST00000137246ENSMUST00000137476ENSMUST00000139406ENSMUST00000148976ENSMUST00000149794ENSMUST00000164233ENSMUSG00000028413ENSMUST00000030121ENSMUST00000108096ENSMUSG00000056412ENSMUST00000121600ENSMUSG00000094959ENSMUST00000179159ENSMUSG00000095871ENSMUST00000175230ENSMUSG00000096377ENSMUST00000177794
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061E_0001ENSG00000086062ENST00000379731ENSG00000122692ENST00000397149CIL_00061E_0002ENSMUSG00000028409ENSMUST00000030117ENSMUSG00000028410ENSMUST00000030118ENSMUST00000125442ENSMUST00000129204ENSMUST00000137246ENSMUST00000148976ENSMUSG00000028413ENSMUST00000030121ENSMUST00000108096ENSMUSG00000056412ENSMUST00000121600ENSMUSG00000094959ENSMUST00000179159ENSMUSG00000095871ENSMUST00000175230ENSMUSG00000096377ENSMUST00000177794
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086062 ENST00000379731 45.408±0.00 14.577±0.00 7.121±0.00 1.745±1.27 14.825±3.35 13.161±2.74 9.696±7.58 21.965±8.48 20.499±18.62 32.771±23.52 5.579±3.41 30.387±17.73 28.598±12.97 24.228±11.54
ENST00000535206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000122692 ENST00000397149 6.779±0.00 6.935±0.00 2.572±0.00 7.447±0.45 6.245±0.02 4.018±0.82 2.522±1.23 4.609±0.96 4.956±2.31 4.611±0.30 4.314±1.07 6.248±1.86 3.540±0.92 6.044±2.88
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028409 ENSMUST00000030117 21.103±3.40 10.231±1.21 22.681±11.79 27.474±9.36 16.588±2.77 12.885±2.20 10.322±0.94 19.114±2.06 23.921±9.83 17.962±1.36 13.331±2.64 25.181±3.31 41.259±10.63 14.874±3.37
ENSMUST00000130503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028410 ENSMUST00000030118 7.335±1.60 3.224±0.54 10.186±3.79 24.766±12.63 4.206±0.69 2.867±0.67 2.904±0.15 11.015±2.85 9.053±2.19 5.854±1.67 4.309±1.04 12.339±7.03 30.449±14.62 9.989±3.51
ENSMUST00000125442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.484±0.00
ENSMUST00000126020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129204 3.156±0.00 N/A 3.232±0.00 9.010±1.71 2.231±0.00 N/A N/A N/A N/A 2.580±0.00 N/A 7.255±2.97 5.419±0.00 N/A
ENSMUST00000137246 N/A N/A N/A 28.818±0.00 N/A N/A N/A N/A N/A N/A N/A 51.659±8.13 78.971±33.03 52.984±0.00
ENSMUST00000137476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148976 N/A N/A N/A 22.867±0.00 N/A N/A N/A N/A N/A N/A N/A 36.989±0.00 51.757±32.80 10.716±0.00
ENSMUST00000149794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028413 ENSMUST00000030121 24.571±4.67 29.859±4.94 28.532±1.07 1.226±0.72 28.875±3.26 32.854±2.25 19.470±1.26 11.130±0.33 14.694±2.27 28.452±2.67 6.292±0.77 32.824±10.71 35.394±12.54 4.420±1.86
ENSMUST00000108096 N/A 52.736±15.18 N/A N/A 10.160±0.56 10.426±0.00 N/A N/A N/A N/A N/A 33.762±15.98 N/A N/A
ENSMUSG00000056412 ENSMUST00000121600 22.925±4.12 11.007±2.31 2.334±0.00 5.579±1.44 20.274±7.14 14.076±8.23 6.669±1.52 10.578±2.87 8.136±5.32 14.224±0.63 1.697±0.68 23.331±17.88 1.781±0.90 11.242±1.91
ENSMUSG00000094959 ENSMUST00000179159 N/A N/A N/A N/A 20592.267±5529.88 30684.551±3093.05 16926.333±4447.39 N/A N/A 17939.400±7230.50 N/A 41577.700±27476.54 N/A N/A
ENSMUSG00000095871 ENSMUST00000175230 11255.604±3259.31 12639.000±516.20 N/A N/A 23397.600±0.00 50186.898±0.00 11083.100±0.00 N/A N/A 10101.210±1503.69 N/A 29421.550±14642.37 N/A N/A
ENSMUSG00000096377 ENSMUST00000177794 N/A N/A N/A N/A N/A 13173.800±0.00 N/A N/A 18461.199±0.00 N/A N/A 28439.199±6060.70 N/A N/A

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