C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380265 HERC6-003 ENSG00000138642 9606 + 4:88378739-88443097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungMusclePlacentaTestisENST00000380265
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Muscle Placenta Testis
ENST00000380265 0.773±0.00 2.206±0.00 2.049±0.00 1.286±0.00 0.465±0.00 0.337±0.00 0.544±0.00 0.307±0.00 0.440±0.00 1.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KK CIL_0000KK_0001 CGP 4:88257620-88443111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031817 Herc6-201 protein_coding Mus_musculus 0 1090

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