C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380338 MLLT3-001 ENSG00000171843 9606 - 9:20341665-20622543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380338 0.425±0.00 0.508±0.00 0.866±0.00 1.484±0.52 0.620±0.16 1.054±0.37 0.255±0.02 0.408±0.37 2.019±0.00 0.861±0.34 0.175±0.00 0.795±0.28 0.342±0.08 0.411±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007D2 CIL_0007D2_0001 CGP 9:19507452-20622543
CIL_0005UZ CIL_0005UZ_0002 CGP 9:20341665-20995955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA:TAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007379 IEA segment specification
GO:0008023 IDA transcription elongation factor complex
GO:0009952 IEA anterior/posterior pattern specification
GO:0070062 IDA extracellular vesicular exosome
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:2000096 IGI positive regulation of Wnt signaling pathway, planar cell polarity pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078090 Mllt3-001 protein_coding Mus_musculus 0 4373
ENSMUST00000141526 Mllt3-005 retained_intron Mus_musculus 0 1676
ENSMUST00000126353 Mllt3-003 protein_coding Mus_musculus 0 1517
ENSMUST00000128930 Mllt3-006 processed_transcript Mus_musculus 0 1288
ENSMUST00000134555 Mllt3-007 processed_transcript Mus_musculus 0 1247
ENSMUST00000149357 Mllt3-002 protein_coding Mus_musculus 0 837
ENSMUST00000142454 Mllt3-004 nonsense_mediated_decay Mus_musculus 0 824
ENSMUST00000148059 Mllt3-010 protein_coding Mus_musculus 0 483
ENSDART00000063400 mllt1-001 protein_coding Danio_rerio 2.00386e-43 183
ENSMUST00000174455 Slco1a6-003 protein_coding Mus_musculus 0.00003 57
ENSMUST00000052416 Lkaaear1-001 protein_coding Mus_musculus 0.00003 57

Loading