C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: APH1B gamma secretase subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380340 APH1B-003 ENSG00000138613 9606 + 15:63277610-63305801 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000380340
Transcript ID Testis
ENST00000380340 34.025±18.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094O CIL_00094O_0001 VISTA 15:62748846-63351985
CIL_00098V CIL_00098V_0001 VISTA 15:62790346-63394142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016485 IEA protein processing
GO:0043085 IEA positive regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034934 Aph1b-001 protein_coding Mus_musculus 0 734
ENSMUST00000057261 Aph1c-002 protein_coding Mus_musculus 0 713
ENSMUST00000169282 Aph1c-001 protein_coding Mus_musculus 0 713
ENSMUST00000168309 Aph1b-002 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000113730 Aph1b-003 protein_coding Mus_musculus 0 313

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