C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin folding cofactor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380377 TBCA-001 ENSG00000171530 9606 - 5:77691166-77776361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380377
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380377 21.352±0.00 20.480±0.00 5.943±0.00 22.046±0.51 9.742±0.40 12.481±6.33 9.842±3.69 28.038±0.44 13.139±0.88 8.971±1.38 3.156±0.00 57.149±35.42 61.948±18.58 37.383±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000979 CIL_000979_0001 VISTA 5:77339400-77940441
CIL_00091A CIL_00091A_0001 VISTA 5:77345011-77945571
CIL_0008DK CIL_0008DK_0001 VISTA 5:77424780-78026683
CIL_00091B CIL_00091B_0001 VISTA 5:77543897-78144918
CIL_0007SL CIL_0007SL_0001 VISTA 5:77545919-78149307
CIL_00091C CIL_00091C_0001 VISTA 5:77551756-78152775
CIL_0007OX CIL_0007OX_0001 UCNEbase 5:77560331-77741345
CIL_00091D CIL_00091D_0001 VISTA 5:77671560-78273382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005737 TAS cytoplasm
GO:0005874 IEA microtubule
GO:0006457 TAS protein folding
GO:0007021 IEA tubulin complex assembly
GO:0007023 TAS post-chaperonin tubulin folding pathway
GO:0015630 IDA microtubule cytoskeleton
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051087 TAS chaperone binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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