C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basonuclin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380667 BNC2-010 ENSG00000173068 9606 - 9:16418810-16870731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMusclePlacentaTestisENST00000380667
Transcript ID Brain Colon Muscle Placenta Testis
ENST00000380667 0.059±0.02 2.708±0.00 8.686±0.00 0.240±0.00 2.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176691 Bnc2-001 protein_coding Mus_musculus 0 4438
ENSMUST00000107198 Bnc2-007 protein_coding Mus_musculus 0 4157
ENSMUST00000102820 Bnc2-002 protein_coding Mus_musculus 0 4157
ENSMUST00000176612 Bnc2-004 protein_coding Mus_musculus 0 3110
ENSMUST00000176971 Bnc2-012 protein_coding Mus_musculus 0 1107
ENSMUST00000176418 Bnc2-006 protein_coding Mus_musculus 0 1105
ENSMUST00000175800 Bnc2-005 protein_coding Mus_musculus 0 1105
ENSMUST00000175757 Bnc2-022 processed_transcript Mus_musculus 0 1083
ENSMUST00000175969 Bnc2-017 protein_coding Mus_musculus 0 695
ENSMUST00000176947 Bnc2-016 protein_coding Mus_musculus 0 617
ENSMUST00000176702 Bnc2-011 protein_coding Mus_musculus 0 603
ENSMUST00000176476 Bnc2-019 processed_transcript Mus_musculus 0 520
ENSMUST00000123276 Bnc2-003 retained_intron Mus_musculus 0 483
ENSMUST00000177277 Bnc2-010 protein_coding Mus_musculus 0 444
ENSMUST00000176346 Bnc2-015 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000177256 Bnc2-018 processed_transcript Mus_musculus 0 396
ENSMUST00000176601 Bnc2-009 protein_coding Mus_musculus 0 265
ENSMUST00000176998 Bnc2-008 protein_coding Mus_musculus 0 265
ENSMUST00000175756 Bnc2-013 protein_coding Mus_musculus 0 263
ENSMUST00000177040 Bnc2-020 protein_coding Mus_musculus 8e-34 150
ENSMUST00000176264 Bnc2-021 processed_transcript Mus_musculus 3e-33 148

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