C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLIS family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381971 GLIS3-008 ENSG00000107249 9606 - 9:3827698-4299916 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0001 CGP 9:3824127-4587469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005794 IDA Golgi apparatus
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162022 Glis3-001 protein_coding Mus_musculus 0 2946
ENSMUST00000161026 Glis3-007 retained_intron Mus_musculus 0 2409
ENSMUST00000065113 Glis3-003 nonsense_mediated_decay Mus_musculus 0 2100
ENSMUST00000112612 Glis3-002 protein_coding Mus_musculus 0 2052
ENSMUST00000159520 Glis3-008 processed_transcript Mus_musculus 0 900
ENSMUST00000162873 Glis3-009 processed_transcript Mus_musculus 0 835
ENSMUST00000159178 Glis3-006 protein_coding Mus_musculus 0 813
ENSMUST00000161328 Glis3-005 protein_coding Mus_musculus 0 813

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