C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382011 MCM5-002 ENSG00000100297 9606 + 22:35400137-35424501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382011 9.677±0.00 25.038±0.00 0.859±0.00 2.371±1.58 5.699±4.95 4.718±2.50 2.337±2.20 3.951±1.91 2.615±2.07 7.910±0.00 4.492±4.27 18.690±18.49 42.595±31.40 28.506±5.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0001 VISTA 22:35286634-35891311
CIL_00094Q CIL_00094Q_0001 VISTA 22:35329925-35944605
CIL_0006NI CIL_0006NI_0002 CGP 22:35380361-35425430
CIL_0003GR CIL_0003GR_0001 CGP 22:35400063-35554001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006270 IEA DNA replication initiation
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IEA MCM complex
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164309 Mcm5-201 protein_coding Mus_musculus 0 2137
ENSDART00000024316 mcm5-001 protein_coding Danio_rerio 0 800

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