C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100297-ENSG00000100302 CGP 9606 22:35400063-35554001
GeneTranscriptPositionBiotype
ENSG00000100297 (MCM5)
minichromosome maintenance complex component 5 		ENST00000216122 (MCM5-001) 35400063-35425430 protein_coding
ENST00000382011 (MCM5-002) 35400137-35424501 protein_coding
ENST00000416905 (MCM5-008) 35400170-35406725 protein_coding
ENST00000417343 (MCM5-012) 35400142-35410008 processed_transcript
ENST00000444778 (MCM5-011) 35400431-35410872 protein_coding
ENST00000451351 (MCM5-010) 35400134-35403257 nonsense_mediated_decay
ENST00000464908 (MCM5-007) 35410359-35415908 processed_transcript
ENST00000465557 (MCM5-006) 35411439-35416672 processed_transcript
ENST00000493076 (MCM5-004) 35410409-35424501 retained_intron
ENST00000493569 (MCM5-005) 35411244-35415965 processed_transcript
ENSG00000100302 (RASD2)
RASD family, member 2 		ENST00000216127 (RASD2-001) 35540868-35554001 protein_coding
ENSG00000233388 (RP4-569D19.5)
 ENST00000417397 (RP4-569D19.5-001) 35501861-35503586 processed_pseudogene
ENSG00000273044 (RP4-569D19.8)
 ENST00000610000 (RP4-569D19.8-001) 35526932-35527415 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005410-ENSMUSG00000034472 CGP 10090 8:75109528-75224113
GeneTranscriptPositionBiotype
ENSMUSG00000005410 (Mcm5)
minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) 		ENSMUST00000164309 (Mcm5-201) 75109528-75128439 protein_coding
ENSMUSG00000034472 (Rasd2)
RASD family, member 2 		ENSMUST00000132133 (Rasd2-002) 75214502-75222371 protein_coding
ENSMUST00000139848 (Rasd2-001) 75213944-75224113 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GR_0001ENSG00000100297ENST00000216122ENST00000382011ENST00000416905ENST00000417343ENST00000444778ENST00000451351ENST00000464908ENST00000465557ENST00000493076ENST00000493569ENSG00000100302ENST00000216127ENSG00000233388ENST00000417397ENSG00000273044ENST00000610000CIL_0003GR_0002ENSMUSG00000005410ENSMUST00000164309ENSMUSG00000034472ENSMUST00000132133ENSMUST00000139848
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GR_0001ENSG00000100297ENST00000216122ENST00000382011ENST00000416905ENST00000417343ENST00000493076ENSG00000100302ENST00000216127ENSG00000233388ENST00000417397ENSG00000273044ENST00000610000CIL_0003GR_0002ENSMUSG00000005410ENSMUST00000164309ENSMUSG00000034472ENSMUST00000132133ENSMUST00000139848
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100297 ENST00000216122 N/A N/A N/A 0.178±0.00 1.205±0.00 0.445±0.00 0.497±0.00 N/A N/A 1.584±0.00 N/A 1.955±0.34 N/A N/A
ENST00000382011 9.677±0.00 25.038±0.00 0.859±0.00 2.371±1.58 5.699±4.95 4.718±2.50 2.337±2.20 3.951±1.91 2.615±2.07 7.910±0.00 4.492±4.27 18.690±18.49 42.595±31.40 28.506±5.95
ENST00000416905 4.837±0.00 N/A N/A 0.653±0.00 4.169±1.85 2.941±0.00 N/A 2.358±0.00 4.179±0.00 N/A 0.764±0.00 7.461±0.00 N/A N/A
ENST00000417343 N/A N/A N/A N/A N/A N/A N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A
ENST00000444778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493076 N/A 3.132±0.00 N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100302 ENST00000216127 0.987±0.00 1.361±0.00 0.021±0.00 7.963±6.29 1.194±0.31 6.727±6.06 1.174±1.06 0.488±0.38 0.471±0.41 2.130±2.07 1.095±0.81 1.792±0.82 0.400±0.31 1.702±1.61
ENSG00000233388 ENST00000417397 0.055±0.00 0.077±0.00 N/A 0.036±0.00 0.050±0.00 0.021±0.00 0.017±0.00 0.035±0.00 0.010±0.00 0.024±0.00 0.011±0.00 0.044±0.01 N/A 0.033±0.00
ENSG00000273044 ENST00000610000 N/A 0.130±0.00 N/A 0.224±0.08 N/A N/A N/A N/A N/A 0.131±0.00 N/A 0.173±0.04 N/A 0.078±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005410 ENSMUST00000164309 6.225±4.04 4.569±0.65 1.199±0.44 10.446±9.53 7.262±2.43 13.534±1.13 1.314±0.15 2.194±0.15 31.997±36.65 4.471±0.53 0.231±0.09 17.328±7.44 19.147±14.27 4.331±1.77
ENSMUSG00000034472 ENSMUST00000132133 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.02 N/A N/A 3.179±0.00 0.235±0.00 0.880±0.15
ENSMUST00000139848 7.660±7.38 1.741±0.13 1.635±0.51 6.020±7.62 0.823±0.38 11.486±4.15 1.021±0.18 1.262±0.50 0.045±0.04 2.407±0.87 16.284±2.11 8.399±2.89 0.774±0.38 1.586±0.80

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