C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164309 Mcm5-201 ENSMUSG00000005410 10090 + 8:75109528-75128439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164309 6.225±4.04 4.569±0.65 1.199±0.44 10.446±9.53 7.262±2.43 13.534±1.13 1.314±0.15 2.194±0.15 31.997±36.65 4.471±0.53 0.231±0.09 17.328±7.44 19.147±14.27 4.331±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NI CIL_0006NI_0003 CGP 8:75093591-75128439
CIL_0003GR CIL_0003GR_0002 CGP 8:75109528-75224113

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006270 IEA DNA replication initiation
GO:0016020 IEA membrane
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IEA MCM complex
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024316 mcm5-001 protein_coding Danio_rerio 0 854
ENST00000216122 MCM5-001 protein_coding Homo_sapiens 0 2654
ENST00000382011 MCM5-002 protein_coding Homo_sapiens 0 2137
ENST00000416905 MCM5-008 protein_coding Homo_sapiens 0 520
ENST00000444778 MCM5-011 protein_coding Homo_sapiens 0 579
ENST00000451351 MCM5-010 nonsense_mediated_decay Homo_sapiens 0.000000000002 77
ENST00000464908 MCM5-007 processed_transcript Homo_sapiens 0 621
ENST00000493076 MCM5-004 retained_intron Homo_sapiens 0 1463

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