C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RanBP-type and C3HC4-type zinc finger containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382181 RBCK1-006 ENSG00000125826 9606 + 20:408313-430966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000382181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000382181 3.156±0.00 7.407±0.00 1.852±0.00 2.725±0.81 5.655±0.00 3.545±2.80 7.182±0.00 8.205±0.00 7.549±0.00 17.459±0.00 8.069±0.99 7.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0001 VISTA 20:23407-624368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028964 Rbck1-002 protein_coding Mus_musculus 0 802
ENSMUST00000109847 Rbck1-001 protein_coding Mus_musculus 0 802
ENSMUST00000130165 Rbck1-005 retained_intron Mus_musculus 0 800
ENSMUST00000145889 Rbck1-006 retained_intron Mus_musculus 0 675
ENSMUST00000144865 Rbck1-008 protein_coding Mus_musculus 0 222

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