C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine family member IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000383832 CPNE9-001 ENSG00000144550 9606 + 3:9703807-9729908 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENST00000383832
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000383832 0.068±0.00 0.247±0.00 5.343±2.58 0.048±0.00 0.168±0.00 0.029±0.00 0.023±0.01 0.058±0.04 0.027±0.00 0.216±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WG CIL_0002WG_0001 CGP 3:9649433-9729908
CIL_00035Z CIL_00035Z_0001 CGP 3:9703807-9748018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041203 Cpne9-001 protein_coding Mus_musculus 0 2447
ENSMUST00000130191 Cpne9-003 nonsense_mediated_decay Mus_musculus 0 2300
ENSMUST00000134523 Cpne9-004 retained_intron Mus_musculus 0 1238
ENSMUST00000132372 Cpne9-002 retained_intron Mus_musculus 0 1218
ENSMUST00000136728 Cpne9-009 processed_transcript Mus_musculus 0 647
ENSMUST00000128148 Cpne9-007 processed_transcript Mus_musculus 0 424
ENSMUST00000138388 Cpne9-008 processed_transcript Mus_musculus 0 420
ENSMUST00000124574 Cpne9-006 retained_intron Mus_musculus 0 261
ENSMUST00000155779 Cpne9-005 processed_transcript Mus_musculus 4.2039e-45 187

Loading