C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: superoxide dismutase 1, soluble
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389995 SOD1-002 ENSG00000142168 9606 + 21:31659666-31668931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartENST00000389995
Transcript ID Breast Heart
ENST00000389995 17.167±0.00 13.936±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MO CIL_0000MO_0002 CGP 21:31118416-31668931
CIL_0000MH CIL_0000MH_0002 CGP 21:31659622-31732075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004784 IEA superoxide dismutase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006801 IEA superoxide metabolic process
GO:0019430 IEA removal of superoxide radicals
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023707 Sod1-201 protein_coding Mus_musculus 0 396
ENSMUST00000120174 Gm8566-001 processed_pseudogene Mus_musculus 0 366

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