C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391389 RP11-134K1.2-001 ENSG00000212695 9606 + 9:8713311-8713841 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000391389
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000391389 0.596±0.00 0.463±0.00 0.272±0.00 0.379±0.00 1.035±0.00 0.127±0.00 0.538±0.00 0.176±0.00 0.663±0.00 0.462±0.26 0.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OT CIL_0003OT_0001 CGP 9:7796490-10612723
CIL_0005UW CIL_0005UW_0002 CGP 9:8314246-12710290
CIL_0007Z3 CIL_0007Z3_0001 VISTA 9:8436481-9038586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054220 Rpl18a-201 protein_coding Mus_musculus 0 571
ENSMUST00000117288 Gm15427-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000080062 Gm17541-201 protein_coding Mus_musculus 0 479
ENSMUST00000172625 Gm18128-001 processed_pseudogene Mus_musculus 0 259

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