C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392102 TTLL4-001 ENSG00000135912 9606 + 2:218710875-218755416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyMuscleOvaryPlacentaENST00000392102
Transcript ID Adrenal Breast Colon Kidney Muscle Ovary Placenta
ENST00000392102 0.457±0.00 0.291±0.00 0.583±0.00 0.578±0.00 0.313±0.00 1.604±0.00 0.757±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000652 CIL_000652_0001 CGP 2:218672026-218755416
CIL_000653 CIL_000653_0001 CGP 2:218710845-218815293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 IEA cilium
GO:0006464 IEA cellular protein modification process
GO:0015631 ISS tubulin binding
GO:0016874 IEA ligase activity
GO:0018095 ISS protein polyglutamylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042125 Ttll4-001 protein_coding Mus_musculus 0 3760
ENSMUST00000113678 Ttll4-008 protein_coding Mus_musculus 0 1903
ENSMUST00000128891 Ttll4-002 retained_intron Mus_musculus 0 760
ENSMUST00000145132 Ttll4-010 processed_transcript Mus_musculus 0 758
ENSMUST00000143925 Ttll4-006 processed_transcript Mus_musculus 0 691
ENSMUST00000143790 Ttll4-011 processed_transcript Mus_musculus 0 453
ENSMUST00000140591 Ttll4-007 processed_transcript Mus_musculus 0 420

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