C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000652_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163482-ENSG00000135912 CGP 9606 2:218672026-218755416
GeneTranscriptPositionBiotype
ENSG00000135912 (TTLL4)
tubulin tyrosine ligase-like family, member 4
ENST00000258398 (TTLL4-201) 218737574-218755416 protein_coding
ENST00000392102 (TTLL4-001) 218710875-218755416 protein_coding
ENST00000415717 (TTLL4-006) 218710849-218737979 protein_coding
ENST00000417196 (TTLL4-018) 218745117-218748897 nonsense_mediated_decay
ENST00000417855 (TTLL4-016) 218751754-218754416 protein_coding
ENST00000424644 (TTLL4-008) 218710994-218737978 protein_coding
ENST00000434241 (TTLL4-019) 218746155-218748919 nonsense_mediated_decay
ENST00000436668 (TTLL4-015) 218748902-218754220 protein_coding
ENST00000437755 (TTLL4-007) 218710912-218738199 protein_coding
ENST00000442769 (TTLL4-003) 218710956-218754693 protein_coding
ENST00000448224 (TTLL4-020) 218747034-218749363 protein_coding
ENST00000457313 (TTLL4-002) 218710845-218754693 protein_coding
ENST00000461181 (TTLL4-009) 218745387-218746329 retained_intron
ENST00000465558 (TTLL4-005) 218746151-218753354 retained_intron
ENST00000467841 (TTLL4-011) 218745995-218749362 retained_intron
ENST00000472527 (TTLL4-017) 218753098-218754503 retained_intron
ENST00000475950 (TTLL4-013) 218746132-218747584 retained_intron
ENST00000480472 (TTLL4-012) 218746096-218749282 retained_intron
ENST00000480929 (TTLL4-004) 218746139-218748654 retained_intron
ENST00000491899 (TTLL4-014) 218746761-218747668 retained_intron
ENST00000494428 (TTLL4-010) 218745553-218748203 retained_intron
ENSG00000163481 (RNF25)
ring finger protein 25
ENST00000295704 (RNF25-001) 218663864-218672411 protein_coding
ENST00000423170 (RNF25-004) 218665154-218671967 nonsense_mediated_decay
ENST00000463188 (RNF25-003) 218664827-218671984 retained_intron
ENST00000473034 (RNF25-002) 218663892-218671977 retained_intron
ENST00000474339 (RNF25-006) 218664167-218664901 retained_intron
ENST00000497832 (RNF25-005) 218665932-218668168 retained_intron
ENSG00000163482 (STK36)
serine/threonine kinase 36
ENST00000295709 (STK36-001) 218672026-218702715 protein_coding
ENST00000392105 (STK36-002) 218672069-218702709 protein_coding
ENST00000414413 (STK36-010) 218680050-218689863 nonsense_mediated_decay
ENST00000419433 (STK36-005) 218696529-218702716 nonsense_mediated_decay
ENST00000422778 (STK36-012) 218680693-218690527 nonsense_mediated_decay
ENST00000424080 (STK36-009) 218672343-218679617 protein_coding
ENST00000440309 (STK36-003) 218672296-218702623 protein_coding
ENST00000455724 (STK36-006) 218672071-218675428 protein_coding
ENST00000462031 (STK36-017) 218697028-218698701 retained_intron
ENST00000468026 (STK36-007) 218672321-218673253 retained_intron
ENST00000470568 (STK36-011) 218684734-218688781 retained_intron
ENST00000473557 (STK36-008) 218672339-218675391 retained_intron
ENST00000473681 (STK36-016) 218694524-218696960 retained_intron
ENST00000480709 (STK36-013) 218688837-218692550 retained_intron
ENST00000486644 (STK36-015) 218693296-218697190 retained_intron
ENST00000492486 (STK36-014) 218692427-218694278 retained_intron
CIL_000652_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033276-ENSMUSG00000033257 CGP 10090 1:74601445-74703730
GeneTranscriptPositionBiotype
ENSMUSG00000033257 (Ttll4)
tubulin tyrosine ligase-like family, member 4
ENSMUST00000042125 (Ttll4-001) 74661745-74703730 protein_coding
ENSMUST00000113678 (Ttll4-008) 74678898-74697977 protein_coding
ENSMUST00000128891 (Ttll4-002) 74695213-74699878 retained_intron
ENSMUST00000129890 (Ttll4-004) 74661817-74681791 protein_coding
ENSMUST00000140591 (Ttll4-007) 74685956-74688650 processed_transcript
ENSMUST00000141119 (Ttll4-003) 74661750-74685357 protein_coding
ENSMUST00000143790 (Ttll4-011) 74695734-74697841 processed_transcript
ENSMUST00000143925 (Ttll4-006) 74685326-74688628 processed_transcript
ENSMUST00000145132 (Ttll4-010) 74690073-74701832 processed_transcript
ENSMUST00000153636 (Ttll4-005) 74661817-74673255 retained_intron
ENSMUST00000155753 (Ttll4-009) 74689423-74690678 retained_intron
ENSMUSG00000033276 (Stk36)
serine/threonine kinase 36
ENSMUST00000087183 (Stk36-001) 74601445-74636894 protein_coding
ENSMUST00000087186 (Stk36-002) 74601639-74636043 protein_coding
ENSMUST00000113694 (Stk36-007) 74601514-74605525 protein_coding
ENSMUST00000123154 (Stk36-005) 74626465-74636894 retained_intron
ENSMUST00000145673 (Stk36-006) 74601480-74636891 retained_intron
ENSMUST00000148456 (Stk36-003) 74601503-74634100 protein_coding
ENSMUST00000155473 (Stk36-004) 74622830-74636086 processed_transcript
ENSMUST00000157007 (Stk36-008) 74622353-74625911 retained_intron
ENSMUST00000189830 (Stk36-009) 74603210-74611256 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000652_0001ENSG00000135912ENST00000258398ENST00000392102ENST00000415717ENST00000417196ENST00000417855ENST00000424644ENST00000434241ENST00000436668ENST00000437755ENST00000442769ENST00000448224ENST00000457313ENST00000461181ENST00000465558ENST00000467841ENST00000472527ENST00000475950ENST00000480472ENST00000480929ENST00000491899ENST00000494428ENSG00000163481ENST00000295704ENST00000423170ENST00000463188ENST00000473034ENST00000474339ENST00000497832ENSG00000163482ENST00000295709ENST00000392105ENST00000414413ENST00000419433ENST00000422778ENST00000424080ENST00000440309ENST00000455724ENST00000462031ENST00000468026ENST00000470568ENST00000473557ENST00000473681ENST00000480709ENST00000486644ENST00000492486CIL_000652_0002ENSMUSG00000033257ENSMUST00000042125ENSMUST00000113678ENSMUST00000128891ENSMUST00000129890ENSMUST00000140591ENSMUST00000141119ENSMUST00000143790ENSMUST00000143925ENSMUST00000145132ENSMUST00000153636ENSMUST00000155753ENSMUSG00000033276ENSMUST00000087183ENSMUST00000087186ENSMUST00000113694ENSMUST00000123154ENSMUST00000145673ENSMUST00000148456ENSMUST00000155473ENSMUST00000157007ENSMUST00000189830
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000652_0001ENSG00000135912ENST00000258398ENST00000392102ENST00000417196ENST00000434241ENST00000436668ENST00000437755ENST00000442769ENST00000457313ENST00000461181ENST00000465558ENST00000472527ENST00000480929ENST00000491899ENSG00000163481ENST00000295704ENST00000423170ENST00000463188ENST00000473034ENST00000474339ENSG00000163482ENST00000295709ENST00000392105ENST00000419433ENST00000424080ENST00000440309ENST00000462031ENST00000480709CIL_000652_0002ENSMUSG00000033257ENSMUST00000042125ENSMUST00000113678ENSMUST00000128891ENSMUST00000129890ENSMUST00000141119ENSMUST00000145132ENSMUSG00000033276ENSMUST00000087183ENSMUST00000087186ENSMUST00000113694ENSMUST00000123154ENSMUST00000145673ENSMUST00000148456ENSMUST00000155473ENSMUST00000157007ENSMUST00000189830
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135912 ENST00000258398 N/A N/A N/A 0.385±0.00 N/A N/A N/A 0.918±0.00 0.293±0.00 N/A N/A 2.490±0.54 N/A 4.057±0.14
ENST00000392102 N/A 0.457±0.00 N/A N/A 0.291±0.00 0.583±0.00 N/A 0.578±0.00 N/A N/A 0.313±0.00 1.604±0.00 0.757±0.08 N/A
ENST00000415717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417196 N/A N/A N/A N/A 0.905±0.00 1.473±0.00 0.481±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000417855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434241 N/A N/A N/A N/A N/A N/A N/A 1.390±0.00 N/A N/A N/A N/A N/A N/A
ENST00000436668 N/A N/A N/A 1.587±0.00 N/A N/A 0.536±0.00 3.120±0.00 N/A N/A 1.326±0.00 7.984±0.00 N/A N/A
ENST00000437755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.194±0.00 N/A N/A N/A
ENST00000442769 0.751±0.00 N/A N/A 0.612±0.27 0.560±0.16 0.422±0.00 0.345±0.26 N/A N/A 1.983±0.00 0.721±0.49 3.149±2.14 1.767±1.03 7.213±2.04
ENST00000448224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457313 0.560±0.00 0.805±0.00 0.149±0.00 N/A 0.450±0.22 N/A N/A 0.639±0.00 0.729±0.04 N/A N/A 2.455±1.49 1.926±0.22 7.124±2.58
ENST00000461181 N/A N/A 1.516±0.00 N/A 1.567±0.00 N/A 0.538±0.00 N/A 2.036±0.00 N/A N/A N/A N/A N/A
ENST00000465558 N/A N/A N/A 2.793±0.00 N/A N/A N/A N/A N/A 2.345±0.00 N/A N/A N/A N/A
ENST00000467841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472527 N/A 3.641±0.00 N/A N/A N/A N/A 1.067±0.00 0.859±0.00 3.046±0.00 N/A 1.640±0.00 11.756±0.00 5.550±0.26 20.760±0.00
ENST00000475950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480929 N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491899 N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163481 ENST00000295704 1.948±0.00 6.409±0.00 N/A 4.114±0.48 2.057±0.86 1.791±0.54 1.192±0.92 4.371±2.65 1.828±0.00 1.528±0.74 2.366±0.98 8.649±7.93 7.530±3.10 11.336±0.00
ENST00000423170 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.385±0.00 3.332±0.00 N/A N/A N/A
ENST00000463188 2.891±0.00 N/A N/A 4.956±0.00 N/A N/A 0.818±0.00 N/A 3.250±0.00 N/A N/A N/A 7.417±0.00 N/A
ENST00000473034 N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A 1.205±0.00 N/A N/A N/A N/A N/A
ENST00000474339 9.967±0.00 21.855±0.00 N/A 11.934±0.49 13.196±0.00 8.142±0.00 3.150±1.64 3.589±0.00 N/A 7.011±0.00 5.190±0.00 N/A 10.077±1.41 N/A
ENST00000497832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163482 ENST00000295709 0.491±0.00 N/A N/A N/A N/A N/A N/A 1.702±0.00 N/A N/A N/A 2.157±0.37 1.140±0.00 N/A
ENST00000392105 N/A 1.492±0.00 N/A N/A N/A 0.642±0.00 N/A N/A N/A 0.473±0.00 N/A 3.387±0.52 N/A 16.459±9.42
ENST00000414413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419433 1.016±0.00 2.636±0.00 0.985±0.00 N/A 1.556±0.00 0.970±0.00 N/A 5.720±0.00 1.009±0.00 N/A 0.689±0.00 8.161±0.94 N/A 10.095±0.00
ENST00000422778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424080 N/A N/A N/A N/A N/A N/A N/A N/A 3.934±0.00 N/A N/A 1.347±0.00 N/A N/A
ENST00000440309 N/A N/A 0.518±0.00 N/A 0.958±0.00 0.603±0.00 N/A 2.416±0.00 0.562±0.00 0.919±0.00 N/A 1.656±1.35 1.226±0.00 12.894±6.07
ENST00000455724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.278±0.00 N/A N/A
ENST00000468026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480709 N/A N/A N/A N/A 3.984±0.00 N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A
ENST00000486644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033257 ENSMUST00000042125 1.610±0.85 1.103±0.41 1.333±0.33 1.771±0.52 1.244±0.47 1.097±0.41 0.545±0.21 1.089±0.44 1.216±0.51 1.928±0.67 0.547±0.11 3.539±1.31 0.921±0.34 6.494±0.68
ENSMUST00000113678 2.063±0.90 1.865±0.85 1.719±0.17 2.333±0.97 2.597±1.94 1.579±0.37 0.667±0.08 1.633±0.47 1.430±0.71 1.493±0.20 1.922±0.42 3.571±1.33 2.961±1.91 16.074±6.14
ENSMUST00000128891 N/A 2.411±0.67 N/A N/A 2.102±0.30 1.536±0.19 N/A N/A N/A 2.502±0.00 N/A 4.643±1.08 N/A N/A
ENSMUST00000129890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.988±0.00
ENSMUST00000140591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.178±0.00
ENSMUST00000143790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145132 2.342±0.88 1.305±0.13 4.678±1.04 6.572±3.56 3.170±1.21 1.536±0.57 1.674±0.18 2.484±0.25 2.740±1.51 2.791±0.56 2.734±0.46 4.399±1.84 2.382±0.89 5.040±0.00
ENSMUST00000153636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033276 ENSMUST00000087183 0.329±0.00 0.905±0.23 0.131±0.00 2.362±0.00 0.279±0.12 0.278±0.00 0.126±0.00 0.767±0.31 0.088±0.02 1.375±0.00 0.070±0.04 1.410±0.50 0.198±0.07 7.971±2.91
ENSMUST00000087186 N/A N/A N/A N/A 0.329±0.00 N/A N/A 0.219±0.00 N/A N/A 0.007±0.00 N/A N/A 3.429±0.00
ENSMUST00000113694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.06 N/A N/A 25.818±0.00
ENSMUST00000123154 0.250±0.00 0.768±0.18 N/A 1.274±0.98 0.266±0.00 0.281±0.06 0.074±0.00 N/A 0.067±0.04 1.940±0.11 0.088±0.02 1.409±0.35 0.324±0.07 N/A
ENSMUST00000145673 0.189±0.00 0.474±0.12 N/A 2.680±0.38 0.242±0.07 0.177±0.09 0.072±0.00 0.331±0.06 0.068±0.03 1.029±0.00 0.029±0.00 1.365±0.67 0.121±0.03 N/A
ENSMUST00000148456 0.569±0.00 N/A N/A N/A 0.215±0.01 0.295±0.00 0.131±0.07 N/A 0.068±0.03 1.260±0.00 0.039±0.00 2.719±0.00 N/A 30.255±4.10
ENSMUST00000155473 0.419±0.13 0.942±0.12 N/A N/A 0.410±0.18 0.179±0.04 0.125±0.08 0.466±0.15 0.170±0.07 2.530±0.34 0.071±0.00 3.789±1.55 0.136±0.00 15.758±0.00
ENSMUST00000157007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A N/A N/A
ENSMUST00000189830 N/A N/A N/A N/A N/A 0.970±0.39 0.328±0.00 N/A 0.441±0.19 N/A N/A N/A 0.608±0.00 N/A

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