C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 117, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392238 FAM117B-001 ENSG00000138439 9606 + 2:202635188-202769757 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392238 2.507±0.00 1.830±0.00 1.874±0.00 2.522±0.09 1.786±0.01 2.166±0.17 0.497±0.17 1.506±0.85 1.005±0.61 1.402±0.05 0.618±0.47 1.759±0.31 1.976±0.85 5.615±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JN CIL_0000JN_0003 CGP 2:202376936-202769757
CIL_0000JO CIL_0000JO_0002 CGP 2:202635188-202871985

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036540 Fam117b-001 protein_coding Mus_musculus 0 2049
ENSMUST00000151630 Fam117b-002 nonsense_mediated_decay Mus_musculus 0 231
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.000002 60
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.000002 60

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