C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074921-ENSDARG00000057688 CGP 7955 6:12765575-12812096
GeneTranscriptPositionBiotype
ENSDARG00000011941 (bmpr2a)
bone morphogenetic protein receptor, type II a (serine/threonine kinase) 		ENSDART00000056764 (bmpr2a-001) 12709568-12763808 protein_coding
ENSDART00000148145 (bmpr2a-002) 12736378-12736938 retained_intron
ENSDART00000150955 (bmpr2a-003) 12737002-12780321 processed_transcript
ENSDARG00000057688 (ical1)
islet cell autoantigen 1-like 		ENSDART00000080408 (ical1-001) 12782664-12812074 protein_coding
ENSDART00000150887 (ical1-002) 12802554-12812096 protein_coding
ENSDARG00000074921 (FAM117B (2 of 2))
family with sequence similarity 117, member B 		ENSDART00000090065 (FAM117B (2 of 2)-201) 12768223-12781813 protein_coding
ENSDART00000156341 (FAM117B (2 of 2)-001) 12765575-12777747 protein_coding
CIL_0000JO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138439-ENSG00000163596 CGP 9606 2:202635188-202871985
GeneTranscriptPositionBiotype
ENSG00000138439 (FAM117B)
family with sequence similarity 117, member B 		ENST00000392238 (FAM117B-001) 202635188-202769757 protein_coding
ENST00000481658 (FAM117B-002) 202635489-202725232 retained_intron
ENSG00000163596 (ICA1L)
islet cell autoantigen 1,69kDa-like 		ENST00000358299 (ICA1L-003) 202777899-202871985 protein_coding
ENST00000392237 (ICA1L-001) 202775967-202871642 protein_coding
ENST00000411681 (ICA1L-013) 202825695-202871046 protein_coding
ENST00000412210 (ICA1L-019) 202821359-202871651 protein_coding
ENST00000416760 (ICA1L-008) 202821422-202871646 protein_coding
ENST00000418208 (ICA1L-016) 202819726-202870788 protein_coding
ENST00000419460 (ICA1L-018) 202819887-202871735 protein_coding
ENST00000420558 (ICA1L-021) 202788990-202870761 protein_coding
ENST00000421334 (ICA1L-012) 202828883-202871467 protein_coding
ENST00000425178 (ICA1L-005) 202819605-202829234 protein_coding
ENST00000432273 (ICA1L-015) 202821420-202870914 protein_coding
ENST00000435143 (ICA1L-010) 202819857-202871266 protein_coding
ENST00000437978 (ICA1L-020) 202821383-202871246 nonsense_mediated_decay
ENST00000438804 (ICA1L-002) 202779070-202871455 nonsense_mediated_decay
ENST00000441547 (ICA1L-022) 202821358-202869597 protein_coding
ENST00000450143 (ICA1L-014) 202819807-202871046 protein_coding
ENST00000454326 (ICA1L-017) 202821427-202870876 protein_coding
ENST00000457524 (ICA1L-009) 202821417-202871442 protein_coding
ENST00000476602 (ICA1L-007) 202819605-202821756 retained_intron
ENST00000484561 (ICA1L-004) 202825445-202871475 retained_intron
ENST00000494560 (ICA1L-006) 202814757-202820021 retained_intron
ENST00000617388 (ICA1L-201) 202773150-202871472 protein_coding
ENSG00000233579 (KRT8P15)
keratin 8 pseudogene 15 		ENST00000425226 (KRT8P15-001) 202840331-202841781 processed_pseudogene
CIL_0000JO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041040-ENSMUSG00000026018 CGP 10090 1:59913006-60043184
GeneTranscriptPositionBiotype
ENSMUSG00000026018 (Ica1l)
islet cell autoantigen 1-like 		ENSMUST00000027172 (Ica1l-001) 59989068-60043087 protein_coding
ENSMUST00000185891 (Ica1l-006) 59982490-59990927 processed_transcript
ENSMUST00000186970 (Ica1l-003) 60020791-60043184 processed_transcript
ENSMUST00000187364 (Ica1l-005) 60015255-60022615 retained_intron
ENSMUST00000189776 (Ica1l-004) 59991124-60028229 protein_coding
ENSMUST00000191251 (Ica1l-002) 59989075-60043122 protein_coding
ENSMUSG00000041040 (Fam117b)
family with sequence similarity 117, member B 		ENSMUST00000036540 (Fam117b-001) 59913006-59985346 protein_coding
ENSMUST00000151630 (Fam117b-002) 59970680-59981515 nonsense_mediated_decay
ENSMUST00000189790 (Fam117b-003) 59979181-59980938 retained_intron
ENSMUSG00000100901 (RP23-27C10.4)
predicted gene, 18829 		ENSMUST00000188150 (RP23-27C10.4-001) 59950403-59952464 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JO_0001ENSDARG00000011941ENSDART00000056764ENSDART00000148145ENSDART00000150955ENSDARG00000057688ENSDART00000080408ENSDART00000150887ENSDARG00000074921ENSDART00000090065ENSDART00000156341CIL_0000JO_0002ENSG00000138439ENST00000392238ENST00000481658ENSG00000163596ENST00000358299ENST00000392237ENST00000411681ENST00000412210ENST00000416760ENST00000418208ENST00000419460ENST00000420558ENST00000421334ENST00000425178ENST00000432273ENST00000435143ENST00000437978ENST00000438804ENST00000441547ENST00000450143ENST00000454326ENST00000457524ENST00000476602ENST00000484561ENST00000494560ENST00000617388ENSG00000233579ENST00000425226CIL_0000JO_0003ENSMUSG00000026018ENSMUST00000027172ENSMUST00000185891ENSMUST00000186970ENSMUST00000187364ENSMUST00000189776ENSMUST00000191251ENSMUSG00000041040ENSMUST00000036540ENSMUST00000151630ENSMUST00000189790ENSMUSG00000100901ENSMUST00000188150
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JO_0001ENSDARG00000011941ENSDART00000056764ENSDART00000148145ENSDARG00000057688ENSDART00000080408ENSDARG00000074921ENSDART00000090065CIL_0000JO_0002ENSG00000138439ENST00000392238ENST00000481658ENSG00000163596ENST00000358299ENST00000392237ENST00000416760ENST00000418208ENST00000419460ENST00000425178ENST00000438804ENST00000457524ENST00000484561ENST00000494560ENST00000617388ENSG00000233579ENST00000425226CIL_0000JO_0003ENSMUSG00000026018ENSMUST00000027172ENSMUST00000185891ENSMUST00000189776ENSMUST00000191251ENSMUSG00000041040ENSMUST00000036540ENSMUSG00000100901ENSMUST00000188150
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011941 ENSDART00000056764 N/A N/A N/A N/A N/A N/A 1.200±0.17 N/A 0.169±0.00 N/A 0.960±0.00 N/A N/A N/A
ENSDART00000148145 N/A N/A N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A N/A N/A N/A N/A
ENSDART00000150955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057688 ENSDART00000080408 N/A N/A N/A 17.510±0.00 N/A N/A N/A 1.763±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000150887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074921 ENSDART00000090065 N/A N/A N/A 19.468±7.89 N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A
ENSDART00000156341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138439 ENST00000392238 2.507±0.00 1.830±0.00 1.874±0.00 2.522±0.09 1.786±0.01 2.166±0.17 0.497±0.17 1.506±0.85 1.005±0.61 1.402±0.05 0.618±0.47 1.759±0.31 1.976±0.85 5.615±0.95
ENST00000481658 N/A N/A N/A N/A N/A N/A N/A 2.218±0.00 N/A N/A 0.971±0.00 N/A N/A N/A
ENSG00000163596 ENST00000358299 N/A N/A 0.712±0.00 3.087±0.00 0.337±0.00 0.181±0.00 0.261±0.00 0.060±0.00 1.120±0.00 0.759±0.00 0.333±0.00 0.471±0.30 0.655±0.00 1.996±0.00
ENST00000392237 0.893±0.00 0.552±0.00 N/A 3.616±1.63 0.434±0.27 0.584±0.48 0.382±0.26 0.697±0.00 0.559±0.00 0.777±0.00 0.206±0.12 0.818±0.71 0.921±0.27 2.922±0.00
ENST00000411681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416760 N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A
ENST00000418208 N/A N/A N/A N/A 1.639±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.453±0.00 N/A N/A N/A
ENST00000420558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425178 N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000432273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438804 N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A 0.442±0.00 N/A N/A N/A 2.318±0.00
ENST00000441547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457524 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.295±0.00 N/A N/A N/A N/A
ENST00000476602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484561 N/A N/A N/A N/A 1.169±0.00 N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494560 N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A 3.060±0.00 N/A N/A N/A N/A N/A
ENST00000617388 N/A 0.147±0.00 0.077±0.00 N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.037±0.00 0.250±0.00 N/A N/A
ENSG00000233579 ENST00000425226 0.012±0.00 0.013±0.00 0.152±0.00 0.180±0.12 0.024±0.00 0.091±0.00 0.061±0.00 N/A 0.059±0.00 N/A 0.879±0.00 0.132±0.02 0.101±0.00 0.718±0.66
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026018 ENSMUST00000027172 N/A N/A N/A 5.930±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.839±2.61
ENSMUST00000185891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.717±0.00 N/A N/A
ENSMUST00000186970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189776 N/A N/A N/A 14.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.719±0.00
ENSMUST00000191251 N/A N/A 1.595±0.00 7.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.657±3.62
ENSMUSG00000041040 ENSMUST00000036540 4.680±1.10 13.291±6.93 3.294±0.64 15.048±7.02 7.158±3.88 13.065±3.03 2.273±0.46 6.925±1.07 1.757±0.92 15.420±3.45 1.062±0.12 8.507±4.05 3.803±1.52 9.103±3.08
ENSMUST00000151630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100901 ENSMUST00000188150 0.051±0.01 N/A 0.025±0.00 0.169±0.04 0.058±0.01 0.146±0.05 0.050±0.01 0.103±0.06 0.027±0.02 0.157±0.10 N/A N/A N/A 0.050±0.02

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