C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392316 MYO1B-002 ENSG00000128641 9606 + 2:191276885-191425389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392316
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392316 10.132±0.00 3.357±0.00 1.503±0.00 3.979±0.00 3.676±0.00 0.640±0.00 11.799±6.79 1.145±0.00 4.490±0.07 0.739±0.00 3.381±1.66 4.125±0.85 1.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0001 VISTA 2:190761403-191362006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046390 Myo1b-001 protein_coding Mus_musculus 0 4449
ENSMUST00000018561 Myo1b-002 protein_coding Mus_musculus 0 3044
ENSMUST00000114537 Myo1b-003 protein_coding Mus_musculus 0 2976
ENSMUST00000114541 Myo1b-013 protein_coding Mus_musculus 0 2974
ENSMUST00000144694 Myo1b-006 protein_coding Mus_musculus 0 1134
ENSMUST00000136701 Myo1b-008 processed_transcript Mus_musculus 0 994
ENSMUST00000136273 Myo1b-014 processed_transcript Mus_musculus 0 747
ENSMUST00000151525 Myo1b-004 retained_intron Mus_musculus 0 737
ENSMUST00000140731 Myo1b-010 processed_transcript Mus_musculus 0 562
ENSMUST00000135125 Myo1b-007 processed_transcript Mus_musculus 0 407
ENSMUST00000145367 Myo1b-012 retained_intron Mus_musculus 0 379
ENSMUST00000140930 Myo1b-011 retained_intron Mus_musculus 0 311
ENSMUST00000126952 Myo1b-009 retained_intron Mus_musculus 2.94273e-44 185

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