C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 1, 91kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392323 STAT1-002 ENSG00000115415 9606 - 2:190975642-191014197 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0001 VISTA 2:190761403-191362006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA:IEA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189347 Stat1-008 protein_coding Mus_musculus 0 2388
ENSMUST00000191435 Stat1-007 protein_coding Mus_musculus 0 2388
ENSMUST00000186574 Stat1-004 protein_coding Mus_musculus 0 2388
ENSMUST00000186857 Stat1-006 protein_coding Mus_musculus 0 2357
ENSMUST00000070968 Stat1-001 protein_coding Mus_musculus 0 2357
ENSMUST00000186057 Stat1-009 protein_coding Mus_musculus 0 2279
ENSMUST00000189244 Stat1-010 protein_coding Mus_musculus 0 686
ENSMUST00000189336 Stat1-015 nonsense_mediated_decay Mus_musculus 0 501
ENSMUST00000189075 Stat1-014 retained_intron Mus_musculus 0 357
ENSMUST00000138438 Stat3-011 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000092671 Stat3-010 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000127638 Stat3-001 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000103114 Stat3-002 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000156645 Stat3-003 processed_transcript Mus_musculus 0.0000000000002 82

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