C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186574 Stat1-004 ENSMUSG00000026104 10090 + 1:52119440-52155412 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000186574
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000186574 10.020±0.53 19.923±2.61 9.577±3.12 0.959±0.03 18.289±3.21 4.050±0.64 2.831±0.83 6.102±0.88 6.635±2.84 5.916±1.54 0.959±0.40 9.680±2.46 6.015±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0002 VISTA 1:51779533-52380137
CIL_0002AL CIL_0002AL_0002 CGP 1:51987148-52161865
CIL_0002SJ CIL_0002SJ_0003 CGP 1:52119440-52233232

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264657 STAT3-001 protein_coding Homo_sapiens 4e-28 132
ENST00000361099 STAT1-001 protein_coding Homo_sapiens 0 2359
ENST00000389272 STAT3-013 protein_coding Homo_sapiens 2e-28 132
ENST00000392322 STAT1-003 protein_coding Homo_sapiens 0 2390
ENST00000392323 STAT1-002 protein_coding Homo_sapiens 0 2388
ENST00000404395 STAT3-002 protein_coding Homo_sapiens 2e-28 132
ENST00000409465 STAT1-011 protein_coding Homo_sapiens 0 2359
ENST00000423282 STAT1-005 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000452281 STAT1-006 nonsense_mediated_decay Homo_sapiens 0 1668
ENST00000464072 STAT1-009 retained_intron Homo_sapiens 0 549
ENST00000540176 STAT1-201 protein_coding Homo_sapiens 0 1637
ENST00000585517 STAT3-012 protein_coding Homo_sapiens 3e-28 132
ENST00000588969 STAT3-011 protein_coding Homo_sapiens 2e-28 132

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