C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stimulated by retinoic acid 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392359 STRA13-002 ENSG00000169689 9606 - 17:82018703-82022918 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryPlacentaTestisENST00000392359
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000392359 11.225±0.00 7.088±0.00 5.268±0.00 13.331±0.00 2.303±0.00 3.852±3.06 8.843±8.09 9.608±6.65 15.595±0.88 7.087±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VS CIL_0004VS_0001 CGP 17:81976807-82024107
CIL_0004VR CIL_0004VR_0001 CGP 17:82018702-82031151

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000712 IMP resolution of meiotic recombination intermediates
GO:0000776 IEA kinetochore
GO:0003677 IDA DNA binding
GO:0003690 IDA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0006281 IEA DNA repair
GO:0007067 IEA mitotic nuclear division
GO:0031297 IMP replication fork processing
GO:0031398 TAS positive regulation of protein ubiquitination
GO:0043240 IDA Fanconi anaemia nuclear complex
GO:0046982 IEA protein heterodimerization activity
GO:0051382 IEA kinetochore assembly
GO:0071821 IDA FANCM-MHF complex

Homologs

No Homologs available.

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