C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392557 BRF1-001 ENSG00000185024 9606 - 14:105209286-105247894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000392557
Transcript ID Colon Liver
ENST00000392557 2.127±0.00 2.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KK CIL_0001KK_0001 CGP 14:105172938-105315589
CIL_0005IK CIL_0005IK_0003 CGP 14:105209286-105315589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000126 IEA:NAS transcription factor TFIIIB complex
GO:0005654 TAS nucleoplasm
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0006384 IEA transcription initiation from RNA polymerase III promoter
GO:0008270 IEA zinc ion binding
GO:0009303 TAS rRNA transcription
GO:0009304 TAS tRNA transcription
GO:0010467 TAS gene expression
GO:0017025 IEA TBP-class protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011302 Brf1-201 protein_coding Mus_musculus 0 1264

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