C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosyltransferase-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392871 GTDC1-008 ENSG00000121964 9606 - 2:143946023-144211582 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLungMusclePlacentaTestisENST00000392871
Transcript ID Adrenal Breast Colon Heart Lung Muscle Placenta Testis
ENST00000392871 2.293±0.00 3.730±0.00 1.923±0.00 2.060±1.24 5.509±0.00 0.957±0.00 1.122±0.00 2.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M8 CIL_0006M8_0001 CGP 2:143091362-144332568
CIL_0008S0 CIL_0008S0_0001 VISTA 2:143654622-144256346
CIL_0007L9 CIL_0007L9_0003 UCNEbase 2:143915206-145198080
CIL_0006M9 CIL_0006M9_0001 CGP 2:143938068-144524580

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049051 Gtdc1-201 protein_coding Mus_musculus 0 1626
ENSMUST00000112810 Gtdc1-001 protein_coding Mus_musculus 0 1626
ENSMUST00000134813 Gtdc1-011 processed_transcript Mus_musculus 0 904
ENSMUST00000148279 Gtdc1-003 protein_coding Mus_musculus 0 654
ENSMUST00000129240 Gtdc1-002 processed_transcript Mus_musculus 0 654

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