C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-transducin repeat containing E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393441 BTRC-201 ENSG00000166167 9606 + 10:101354033-101557319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverOvaryPlacentaTestisENST00000393441
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENST00000393441 0.568±0.00 1.028±0.00 4.712±0.00 0.988±0.00 1.404±0.00 0.685±0.00 1.080±0.01 0.725±0.00 1.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0007ZR CIL_0007ZR_0001 VISTA 10:101034855-101635629
CIL_00089J CIL_00089J_0001 VISTA 10:101185253-101786853
CIL_000942 CIL_000942_0001 VISTA 10:101206892-101808215
CIL_0007PC CIL_0007PC_0001 UCNEbase 10:101219422-101507851
CIL_0005NA CIL_0005NA_0001 CGP 10:101226195-101557321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111936 Btrc-202 protein_coding Mus_musculus 0 2425
ENSMUST00000065601 Btrc-201 protein_coding Mus_musculus 0 2425

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