C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394409 PPP2R2B-002 ENSG00000156475 9606 - 5:146581146-146878642 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungMuscleOvaryENST00000394409
Transcript ID Adrenal Brain Breast Heart Liver Lung Muscle Ovary
ENST00000394409 0.064±0.00 3.786±1.25 0.082±0.00 0.014±0.00 0.052±0.00 0.020±0.01 0.008±0.00 0.031±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AE CIL_0001AE_0001 CGP 5:146513103-147084784
CIL_0001AF CIL_0001AF_0001 CGP 5:146581146-147387852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0005515 IPI:IEA protein binding
GO:0005739 ISS mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0005856 IEA cytoskeleton
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117687 Ppp2r2b-004 protein_coding Mus_musculus 0 3107
ENSMUST00000120632 Ppp2r2b-003 protein_coding Mus_musculus 0 2723
ENSMUST00000025377 Ppp2r2b-001 protein_coding Mus_musculus 0 2381
ENSMUST00000136118 Ppp2r2b-002 processed_transcript Mus_musculus 0 2351
ENSDART00000014124 ppp2r2d-201 protein_coding Danio_rerio 0 758
ENSDART00000114401 ppp2r2d-202 protein_coding Danio_rerio 0 758
ENSMUST00000153737 Ppp2r2b-006 processed_transcript Mus_musculus 0 368
ENSMUST00000155262 Ppp2r2b-005 processed_transcript Mus_musculus 4e-26 126

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