C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114401 ppp2r2d-202 ENSDARG00000078044 7955 + 12:43009136-43170897 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114401
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114401 6.945±3.03 1.270±0.43 1.383±0.38 0.117±0.00 0.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0001 CGP 12:43009019-43191180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007049 IEA cell cycle
GO:0007067 ISS mitosis
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity
GO:0010458 ISS exit from mitosis
GO:0050790 ISS regulation of catalytic activity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025377 Ppp2r2b-001 protein_coding Mus_musculus 0 730
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 1086
ENSMUST00000117687 Ppp2r2b-004 protein_coding Mus_musculus 0 730
ENSMUST00000120632 Ppp2r2b-003 protein_coding Mus_musculus 0 730
ENSMUST00000136118 Ppp2r2b-002 processed_transcript Mus_musculus 0 575
ENSMUST00000153737 Ppp2r2b-006 processed_transcript Mus_musculus 6.99949e-42 174
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 1086
ENST00000335585 PPP2R2C-002 protein_coding Homo_sapiens 0 688
ENST00000336640 PPP2R2B-003 protein_coding Homo_sapiens 0 761
ENST00000382599 PPP2R2C-001 protein_coding Homo_sapiens 0 691
ENST00000394409 PPP2R2B-002 protein_coding Homo_sapiens 0 758
ENST00000394411 PPP2R2B-017 protein_coding Homo_sapiens 0 758
ENST00000394413 PPP2R2B-201 protein_coding Homo_sapiens 0 756
ENST00000394414 PPP2R2B-001 protein_coding Homo_sapiens 0 758
ENST00000453001 PPP2R2B-202 protein_coding Homo_sapiens 0 756
ENST00000504198 PPP2R2B-009 protein_coding Homo_sapiens 0 761
ENST00000506140 PPP2R2C-003 protein_coding Homo_sapiens 0 686
ENST00000507294 PPP2R2C-004 protein_coding Homo_sapiens 0 686
ENST00000508545 PPP2R2B-008 protein_coding Homo_sapiens 0 756
ENST00000512639 PPP2R2B-010 nonsense_mediated_decay Homo_sapiens 0 756
ENST00000512984 PPP2R2B-013 protein_coding Homo_sapiens 9e-31 137
ENST00000515571 PPP2R2C-005 protein_coding Homo_sapiens 0 686
ENST00000530902 PPP2R2B-016 processed_transcript Homo_sapiens 0 758

Loading