C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Z4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032725-ENSDARG00000063213 CGP 7955 6:6187501-6212328
GeneTranscriptPositionBiotype
ENSDARG00000032725 (rps27a)
ribosomal protein S27a 		ENSDART00000129530 (rps27a-001) 6187501-6190334 protein_coding
ENSDART00000154932 (rps27a-005) 6188682-6190292 processed_transcript
ENSDART00000156817 (rps27a-003) 6187690-6190332 retained_intron
ENSDART00000156859 (rps27a-002) 6187547-6190331 protein_coding
ENSDART00000157035 (rps27a-004) 6188608-6190332 retained_intron
ENSDARG00000063213 (mtif2)
mitochondrial translational initiation factor 2 		ENSDART00000092172 (mtif2-001) 6192216-6212328 protein_coding
ENSDART00000133020 (mtif2-002) 6210353-6212284 retained_intron
CIL_0000Z4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143947-ENSG00000085760 CGP 9606 2:55231903-55269347
GeneTranscriptPositionBiotype
ENSG00000085760 (MTIF2)
mitochondrial translational initiation factor 2 		ENST00000263629 (MTIF2-001) 55236620-55269248 protein_coding
ENST00000366137 (MTIF2-005) 55263641-55269179 protein_coding
ENST00000394600 (MTIF2-201) 55236621-55263868 protein_coding
ENST00000403721 (MTIF2-002) 55236595-55269243 protein_coding
ENST00000404297 (MTIF2-009) 55263648-55267787 protein_coding
ENST00000412530 (MTIF2-011) 55263837-55269138 protein_coding
ENST00000417363 (MTIF2-012) 55263828-55269038 protein_coding
ENST00000417741 (MTIF2-006) 55252542-55267604 processed_transcript
ENST00000418823 (MTIF2-010) 55240011-55249534 protein_coding
ENST00000420637 (MTIF2-008) 55263780-55269193 protein_coding
ENST00000441307 (MTIF2-007) 55263647-55269347 protein_coding
ENST00000446660 (MTIF2-003) 55254767-55269217 processed_transcript
ENSG00000143947 (RPS27A)
ribosomal protein S27a 		ENST00000272317 (RPS27A-001) 55232402-55235853 protein_coding
ENST00000402285 (RPS27A-003) 55231903-55235588 protein_coding
ENST00000404735 (RPS27A-002) 55232678-55235755 protein_coding
ENST00000449323 (RPS27A-004) 55232432-55234959 protein_coding
ENST00000463185 (RPS27A-007) 55232681-55233369 retained_intron
ENST00000468810 (RPS27A-010) 55233357-55234923 retained_intron
ENST00000471772 (RPS27A-009) 55232688-55233833 retained_intron
ENST00000478196 (RPS27A-008) 55232689-55235184 retained_intron
ENST00000494756 (RPS27A-012) 55232694-55233718 retained_intron
ENST00000495843 (RPS27A-005) 55232795-55235609 retained_intron
ENST00000611893 (RPS27A-201) 55232405-55234301 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z4_0001ENSDARG00000032725ENSDART00000129530ENSDART00000154932ENSDART00000156817ENSDART00000156859ENSDART00000157035ENSDARG00000063213ENSDART00000092172ENSDART00000133020CIL_0000Z4_0002ENSG00000085760ENST00000263629ENST00000366137ENST00000394600ENST00000403721ENST00000404297ENST00000412530ENST00000417363ENST00000417741ENST00000418823ENST00000420637ENST00000441307ENST00000446660ENSG00000143947ENST00000272317ENST00000402285ENST00000404735ENST00000449323ENST00000463185ENST00000468810ENST00000471772ENST00000478196ENST00000494756ENST00000495843ENST00000611893
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z4_0001ENSDARG00000032725ENSDART00000129530ENSDART00000154932ENSDART00000156859ENSDART00000157035ENSDARG00000063213ENSDART00000092172CIL_0000Z4_0002ENSG00000085760ENST00000263629ENST00000394600ENST00000403721ENST00000417741ENST00000418823ENSG00000143947ENST00000272317ENST00000402285ENST00000404735ENST00000478196ENST00000611893
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032725 ENSDART00000129530 N/A N/A N/A 261.646±58.28 N/A N/A 1002.705±717.40 600.792±590.99 501.808±0.00 N/A 642.311±0.00 N/A N/A N/A
ENSDART00000154932 N/A N/A N/A 112.742±0.00 N/A N/A 896.582±0.00 2.474±0.00 325.277±0.00 N/A 413.069±0.00 N/A N/A N/A
ENSDART00000156817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156859 N/A N/A N/A 1.869±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157035 N/A N/A N/A 0.200±0.06 N/A N/A 1.350±0.04 0.890±0.19 N/A N/A N/A N/A N/A N/A
ENSDARG00000063213 ENSDART00000092172 N/A N/A N/A 4.270±0.65 N/A N/A 6.822±1.47 13.067±6.40 0.313±0.00 N/A 3.226±0.00 N/A N/A N/A
ENSDART00000133020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085760 ENST00000263629 2.019±0.00 6.087±0.00 1.666±0.00 2.240±1.40 2.361±1.44 3.874±0.01 6.897±2.46 3.214±1.21 3.126±1.19 0.996±0.10 1.469±0.59 5.949±3.38 4.589±2.95 5.647±2.26
ENST00000366137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394600 N/A N/A N/A 1.293±0.16 1.997±0.02 3.109±0.72 2.923±0.00 3.021±1.06 4.979±0.00 2.012±0.00 2.120±1.74 2.153±0.98 0.904±0.00 1.940±0.05
ENST00000403721 1.180±0.00 1.790±0.00 N/A 1.235±0.00 0.760±0.00 N/A N/A 2.752±0.00 N/A 0.823±0.00 N/A 6.382±5.16 3.355±0.00 3.102±1.68
ENST00000404297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417741 N/A N/A N/A N/A 2.563±0.00 N/A N/A 4.868±0.00 3.524±0.00 1.709±0.00 N/A N/A N/A N/A
ENST00000418823 N/A 5.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143947 ENST00000272317 17.814±0.00 N/A 32.916±0.00 57.677±0.00 31.559±16.17 129.351±0.00 21.458±0.00 68.096±0.00 143.796±0.00 77.493±0.00 20.826±0.00 56.530±8.55 N/A N/A
ENST00000402285 52.310±0.00 122.891±0.00 N/A 25.325±0.00 93.326±0.00 193.657±0.00 127.663±0.00 165.896±0.00 137.917±0.00 577.324±0.00 114.644±0.00 776.571±655.98 182.057±0.00 75.330±0.00
ENST00000404735 73.585±0.00 168.954±0.00 N/A 65.089±12.68 43.707±14.49 140.867±0.00 8.457±0.00 30.231±5.90 35.162±0.00 N/A 27.171±14.30 199.873±155.46 239.662±85.70 117.249±22.78
ENST00000449323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478196 N/A N/A N/A 46.449±0.00 71.176±0.00 N/A 9.190±0.00 45.925±0.00 N/A 88.146±0.00 47.211±0.00 78.884±0.00 N/A N/A
ENST00000494756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611893 N/A N/A 37.055±0.00 N/A N/A N/A 14.491±0.00 N/A N/A N/A 41.500±0.00 112.839±0.00 N/A N/A

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