C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Z6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063213-ENSDARG00000078440 CGP 7955 6:6192216-6263372
GeneTranscriptPositionBiotype
ENSDARG00000063213 (mtif2)
mitochondrial translational initiation factor 2 		ENSDART00000092172 (mtif2-001) 6192216-6212328 protein_coding
ENSDART00000133020 (mtif2-002) 6210353-6212284 retained_intron
ENSDARG00000078440 (ccdc88aa)
coiled-coil domain containing 88Aa 		ENSDART00000115018 (ccdc88aa-001) 6218020-6263372 protein_coding
CIL_0000Z6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085760-ENSG00000115355 CGP 9606 2:55236595-55419921
GeneTranscriptPositionBiotype
ENSG00000085760 (MTIF2)
mitochondrial translational initiation factor 2 		ENST00000263629 (MTIF2-001) 55236620-55269248 protein_coding
ENST00000366137 (MTIF2-005) 55263641-55269179 protein_coding
ENST00000394600 (MTIF2-201) 55236621-55263868 protein_coding
ENST00000403721 (MTIF2-002) 55236595-55269243 protein_coding
ENST00000404297 (MTIF2-009) 55263648-55267787 protein_coding
ENST00000412530 (MTIF2-011) 55263837-55269138 protein_coding
ENST00000417363 (MTIF2-012) 55263828-55269038 protein_coding
ENST00000417741 (MTIF2-006) 55252542-55267604 processed_transcript
ENST00000418823 (MTIF2-010) 55240011-55249534 protein_coding
ENST00000420637 (MTIF2-008) 55263780-55269193 protein_coding
ENST00000441307 (MTIF2-007) 55263647-55269347 protein_coding
ENST00000446660 (MTIF2-003) 55254767-55269217 processed_transcript
ENSG00000115355 (CCDC88A)
coiled-coil domain containing 88A 		ENST00000263630 (CCDC88A-001) 55287842-55419856 protein_coding
ENST00000336838 (CCDC88A-002) 55287842-55419613 protein_coding
ENST00000412148 (CCDC88A-006) 55288178-55328425 protein_coding
ENST00000413716 (CCDC88A-201) 55287847-55419921 protein_coding
ENST00000426576 (CCDC88A-005) 55294173-55334345 protein_coding
ENST00000430086 (CCDC88A-009) 55355712-55399777 protein_coding
ENST00000436346 (CCDC88A-202) 55287847-55419921 protein_coding
ENST00000444458 (CCDC88A-003) 55288088-55309207 protein_coding
ENST00000456975 (CCDC88A-008) 55295797-55328396 protein_coding
ENST00000468534 (CCDC88A-010) 55332415-55334350 retained_intron
ENST00000471947 (CCDC88A-004) 55403387-55419856 processed_transcript
ENST00000474059 (CCDC88A-011) 55309237-55317753 processed_transcript
ENST00000476903 (CCDC88A-012) 55313829-55316051 processed_transcript
ENST00000621814 (CCDC88A-203) 55334264-55419613 protein_coding
ENSG00000162997 (PRORSD1P)
prolyl-tRNA synthetase associated domain containing 1, pseudogene 		ENST00000295112 (PRORSD1P-001) 55282329-55284437 unitary_pseudogene
ENST00000563365 (PRORSD1P-002) 55282319-55284472 processed_transcript
ENST00000579162 (PRORSD1P-004) 55282329-55284522 processed_transcript
ENSG00000206964 (Y_RNA)
Y RNA 		ENST00000384237 (Y_RNA.1-659) 55286018-55286128 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z6_0001ENSDARG00000063213ENSDART00000092172ENSDART00000133020ENSDARG00000078440ENSDART00000115018CIL_0000Z6_0002ENSG00000085760ENST00000263629ENST00000366137ENST00000394600ENST00000403721ENST00000404297ENST00000412530ENST00000417363ENST00000417741ENST00000418823ENST00000420637ENST00000441307ENST00000446660ENSG00000115355ENST00000263630ENST00000336838ENST00000412148ENST00000413716ENST00000426576ENST00000430086ENST00000436346ENST00000444458ENST00000456975ENST00000468534ENST00000471947ENST00000474059ENST00000476903ENST00000621814ENSG00000162997ENST00000295112ENST00000563365ENST00000579162ENSG00000206964ENST00000384237
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z6_0001ENSDARG00000063213ENSDART00000092172ENSDARG00000078440ENSDART00000115018CIL_0000Z6_0002ENSG00000085760ENST00000263629ENST00000394600ENST00000403721ENST00000417741ENST00000418823ENSG00000115355ENST00000263630ENST00000336838ENST00000412148ENST00000413716ENST00000426576ENST00000436346ENST00000444458ENST00000621814ENSG00000162997ENST00000295112ENST00000563365ENST00000579162ENSG00000206964ENST00000384237
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063213 ENSDART00000092172 N/A N/A N/A 4.270±0.65 N/A N/A 6.822±1.47 13.067±6.40 0.313±0.00 N/A 3.226±0.00 N/A N/A N/A
ENSDART00000133020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078440 ENSDART00000115018 N/A N/A N/A 0.775±0.12 N/A N/A 0.214±0.18 0.289±0.23 N/A N/A 0.064±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085760 ENST00000263629 2.019±0.00 6.087±0.00 1.666±0.00 2.240±1.40 2.361±1.44 3.874±0.01 6.897±2.46 3.214±1.21 3.126±1.19 0.996±0.10 1.469±0.59 5.949±3.38 4.589±2.95 5.647±2.26
ENST00000366137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394600 N/A N/A N/A 1.293±0.16 1.997±0.02 3.109±0.72 2.923±0.00 3.021±1.06 4.979±0.00 2.012±0.00 2.120±1.74 2.153±0.98 0.904±0.00 1.940±0.05
ENST00000403721 1.180±0.00 1.790±0.00 N/A 1.235±0.00 0.760±0.00 N/A N/A 2.752±0.00 N/A 0.823±0.00 N/A 6.382±5.16 3.355±0.00 3.102±1.68
ENST00000404297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417741 N/A N/A N/A N/A 2.563±0.00 N/A N/A 4.868±0.00 3.524±0.00 1.709±0.00 N/A N/A N/A N/A
ENST00000418823 N/A 5.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115355 ENST00000263630 N/A N/A N/A 2.935±0.00 N/A N/A N/A N/A N/A 0.415±0.00 N/A 2.364±0.48 N/A N/A
ENST00000336838 0.320±0.00 N/A N/A 2.571±0.20 N/A 0.344±0.00 0.484±0.00 N/A N/A 1.141±0.78 N/A N/A N/A 1.298±0.00
ENST00000412148 N/A N/A N/A N/A N/A 1.173±0.00 N/A N/A 0.627±0.00 N/A 0.513±0.06 1.382±0.00 0.364±0.00 6.503±0.00
ENST00000413716 N/A N/A N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A 1.180±1.04 2.291±0.00 7.298±5.77
ENST00000426576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.751±0.00
ENST00000430086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436346 1.267±0.00 0.444±0.00 N/A 7.863±0.00 0.361±0.00 0.926±0.05 0.895±0.07 N/A 0.669±0.11 1.359±0.83 N/A 1.376±0.00 0.286±0.00 2.866±0.00
ENST00000444458 0.795±0.00 1.450±0.00 N/A 7.079±1.74 1.247±0.00 1.013±0.00 0.715±0.00 2.126±0.75 0.627±0.00 1.408±0.00 0.296±0.00 2.011±0.21 0.823±0.23 3.222±0.00
ENST00000456975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621814 N/A N/A 1.503±0.00 N/A 3.227±0.00 2.625±0.00 N/A 2.462±0.00 3.559±0.00 2.931±0.00 0.490±0.00 6.164±0.00 10.234±0.00 57.256±0.00
ENSG00000162997 ENST00000295112 N/A N/A N/A N/A 0.329±0.02 N/A N/A 0.603±0.00 N/A N/A N/A 1.199±0.29 0.099±0.00 N/A
ENST00000563365 0.597±0.00 1.512±0.00 0.426±0.00 0.659±0.38 0.561±0.07 0.855±0.58 0.530±0.08 0.630±0.02 0.150±0.12 0.605±0.07 0.054±0.03 0.680±0.12 0.131±0.06 0.754±0.14
ENST00000579162 N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206964 ENST00000384237 N/A 0.688±0.00 N/A 0.170±0.00 0.333±0.00 N/A N/A 0.162±0.00 N/A N/A N/A 20.429±0.00 N/A N/A

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