C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11 family interacting protein 4 (class II)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394744 RAB11FIP4-002 ENSG00000131242 9606 + 17:31488000-31531849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394744 0.215±0.00 3.380±0.00 1.549±0.00 14.051±0.00 0.554±0.00 2.238±0.00 0.731±0.31 2.904±1.55 0.698±0.00 3.145±1.17 0.271±0.13 5.921±5.47 11.028±6.30 21.245±6.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VQ CIL_0000VQ_0001 CGP 17:31317560-31538217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IMP cytokinesis
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005768 IDA endosome
GO:0006810 IEA transport
GO:0016032 IEA viral process
GO:0017137 IPI Rab GTPase binding
GO:0030139 IDA endocytic vesicle
GO:0030306 IPI ADP-ribosylation factor binding
GO:0030496 IDA midbody
GO:0032154 IDA cleavage furrow
GO:0042803 IDA protein homodimerization activity
GO:0055038 IDA recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017783 Rab11fip4-001 protein_coding Mus_musculus 0 1803
ENSMUST00000155381 Rab11fip4-002 protein_coding Mus_musculus 0 339

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