C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear speckle splicing regulatory protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394826 NSRP1-005 ENSG00000126653 9606 + 17:30116820-30185744 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000394826
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000394826 4.770±0.00 4.250±0.00 6.070±0.00 4.071±0.00 6.282±0.00 2.680±0.00 2.619±0.00 2.384±0.00 2.342±0.00 4.438±0.00 6.909±5.72 10.671±4.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102494 Ccdc55-001 protein_coding Mus_musculus 0 1051
ENSMUST00000127758 Ccdc55-002 protein_coding Mus_musculus 3e-40 171
ENSMUST00000134685 Ccdc55-003 processed_transcript Mus_musculus 7e-17 94

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