C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134685 Ccdc55-003 ENSMUSG00000037958 10090 - 11:77054494-77078435 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverENSMUST00000134685
Transcript ID Kidney Liver
ENSMUST00000134685 0.979±0.22 0.661±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247026 NSRP1-001 protein_coding Homo_sapiens 0 263
ENST00000394826 NSRP1-005 nonsense_mediated_decay Homo_sapiens 7e-17 94
ENST00000444067 NSRP1P1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000467446 NSRP1-009 retained_intron Homo_sapiens 3e-26 122
ENST00000475652 NSRP1-002 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000479218 NSRP1-007 protein_coding Homo_sapiens 3e-26 122
ENST00000540900 NSRP1-004 processed_transcript Homo_sapiens 0.000000000000001 90
ENST00000577289 NSRP1-015 processed_transcript Homo_sapiens 2e-17 94
ENST00000580103 NSRP1-008 protein_coding Homo_sapiens 0 198
ENST00000581048 NSRP1-011 processed_transcript Homo_sapiens 2e-17 94
ENST00000583301 NSRP1-012 processed_transcript Homo_sapiens 7e-38 161
ENST00000584154 NSRP1-010 nonsense_mediated_decay Homo_sapiens 5.99756e-43 178
ENST00000584317 NSRP1-013 nonsense_mediated_decay Homo_sapiens 3e-40 169
ENST00000584423 NSRP1-006 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000585881 NSRP1-003 protein_coding Homo_sapiens 8e-17 92
ENST00000588614 NSRP1-014 protein_coding Homo_sapiens 0 200
ENST00000589608 NSRP1-016 nonsense_mediated_decay Homo_sapiens 2e-26 122
ENST00000612959 NSRP1-201 protein_coding Homo_sapiens 0.000000000000001 90

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