C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulocalbin 2, EF-hand calcium binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394883 RCN2-003 ENSG00000117906 9606 + 15:76931755-76949850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394883
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394883 2.859±0.00 8.391±0.00 16.746±6.88 7.989±5.75 3.051±0.79 3.961±3.34 12.595±0.00 2.627±0.48 10.635±0.00 3.311±2.40 13.552±7.59 9.238±2.08 26.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114276 Rcn2-001 protein_coding Mus_musculus 0 1230
ENSMUST00000147842 Rcn2-002 nonsense_mediated_decay Mus_musculus 0 1230
ENSMUST00000144869 Rcn2-004 retained_intron Mus_musculus 2e-36 158

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