C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulocalbin 2, EF-hand calcium binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394885 RCN2-001 ENSG00000117906 9606 + 15:76931619-76954392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLiverLungOvaryPlacentaTestisENST00000394885
Transcript ID Adipose Adrenal Colon Liver Lung Ovary Placenta Testis
ENST00000394885 0.347±0.00 0.589±0.00 0.389±0.00 0.206±0.00 0.280±0.00 4.773±0.00 4.862±0.00 9.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114276 Rcn2-001 protein_coding Mus_musculus 0 1810
ENSMUST00000147842 Rcn2-002 nonsense_mediated_decay Mus_musculus 0 1808
ENSMUST00000144869 Rcn2-004 retained_intron Mus_musculus 2e-36 159

Loading