C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: son of sevenless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395038 SOS1-003 ENSG00000115904 9606 - 2:38985686-39120450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395038
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395038 1.235±0.00 2.967±0.00 2.397±1.29 3.694±1.10 2.890±0.00 2.383±0.27 1.898±0.00 4.750±0.00 4.839±0.00 0.881±0.00 3.816±0.00 0.692±0.00 2.869±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000675 CIL_000675_0001 CGP 2:38981396-39229588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0046982 IEA protein heterodimerization activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068714 Sos1-201 protein_coding Mus_musculus 0 5541

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